RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZNF37AP17032 561 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SOX6P35712 828 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SEPHS1P49903 392 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 RABGGTBP53611 331 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 NRG1Q02297 640 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 CEACAM7Q14002 265 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SOWAHAQ2M3V2 549 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 GLYATQ6IB77 296 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 ATG14Q6ZNE5 492 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SETD9Q8NE22 299 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 CYTH4Q9UIA0 394 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 RAD51BO15315 384 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 VPS4BO75351 444 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 THP07101 528 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 MSH3P20585 1137 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 ATP6V1E1P36543 226 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 NDUFV1P49821 464 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 IKBKEQ14164 716 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC10A6Q3KNW5 377 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZBED5Q49AG3 693 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 RNF19BQ6ZMZ0 732 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SVOPQ8N4V2 548 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SENP8Q96LD8 212 aa13.19□□□□□ -0.3
TRAPPC9-201ENST00000389328 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 TMEM247A6NEH6 219 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 DLX3O60479 287 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 SERPINF2P08697 491 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ODC1P11926 461 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF12P17014 697 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 DDR2Q16832 855 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 NCBP2-AS2Q69YL0 99 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 CHST15Q7LFX5 561 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 PAGE2Q7Z2X7 111 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 LZTR1Q8N653 840 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF540Q8NDQ6 660 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 PHC3Q8NDX5 983 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 HM13Q8TCT9 377 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ACTR8Q9H981 624 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 TEKT2Q9UIF3 430 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 CDH9Q9ULB4 789 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 VPS9D1Q9Y2B5 631 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 CAPN14A8MX76 684 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 YWHAQP27348 245 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 RHDQ02161 417 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 FSCN1Q16658 493 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 SPANXN2Q5MJ10 180 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 C15orf39Q6ZRI6 1047 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ANKLE1Q8NAG6 615 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 TAMM41Q96BW9 452 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 HBEGFQ99075 208 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 RHOBTB2Q9BYZ6 727 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZFP14Q9HCL3 533 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZNF112Q9UJU3 913 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC22A3O75751 556 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 IDO1P14902 403 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 RPL26P61254 145 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 SP2Q02086 613 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ARHGEF7Q14155 803 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 C11orf91Q3C1V1 193 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 GPSM1Q86YR5 675 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ATP6V0D2Q8N8Y2 350 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ELMO1Q92556 727 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 TPD52L3Q96J77 140 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 KLHL5Q96PQ7 755 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ALG2Q9H553 416 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 ZBTB26Q9HCK0 441 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 MPP6Q9NZW5 540 aa13.18□□□□□ -0.3
TRAPPC9-201ENST00000389328 H3BMM5 538 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 FFAR3O14843 346 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 GPR42O15529 346 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 PIGRP01833 764 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 MRPL28Q13084 256 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 HECTD2Q5U5R9 776 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 THAP5Q7Z6K1 395 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 CPSF7Q8N684 471 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 TWIST2Q8WVJ9 160 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 TRMOQ9BU70 441 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 GBA3Q9H227 469 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 RMND5AQ9H871 391 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 GLOD4Q9HC38 313 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SLC13A4Q9UKG4 626 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 CNTN6Q9UQ52 1028 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 MYO5AQ9Y4I1 1855 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 A0A0J9YVX5 310 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 LSM1O15116 133 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 TRIM24O15164 1050 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 RAMP2O60895 175 aa13.17□□□□□ -0.3
TRAPPC9-201ENST00000389328 SNNO75324 88 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms