RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 EEF1GP26641 437 aaKnown RBP16.09■□□□□ 0.17
VCX3A-201ENST00000381089 SERPINA4P29622 427 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 MMP12P39900 470 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 MAPK10P53779 464 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 GSCP56915 257 aaPredicted RBP16.09■□□□□ 0.17
VCX3A-201ENST00000381089 FMO1Q01740 532 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
VCX3A-201ENST00000381089 ZFP36L1Q07352 338 aaKnown RBP16.09■□□□□ 0.17
VCX3A-201ENST00000381089 TSR1Q2NL82 804 aaKnown RBP16.09■□□□□ 0.17
VCX3A-201ENST00000381089 MAP9Q49MG5 647 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 C14orf28Q4W4Y0 310 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 PHF19Q5T6S3 580 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 OGFOD3Q6PK18 319 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 SPRED1Q7Z699 444 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 UMODL1-AS1Q8N2C9 162 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 NETO2Q8NC67 525 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 KIAA1524Q8TCG1 905 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 MAGEB5Q9BZ81 275 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 DPEP2Q9H4A9 486 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 ATP13A3Q9H7F0 1226 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 STARD5Q9NSY2 213 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 LRIT1Q9P2V4 623 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 BOD1L1Q8NFC6 3051 aa16.09■□□□□ 0.17
VCX3A-201ENST00000381089 LRP4O75096 1905 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 PRAMEF33A0A0G2JMD5 474 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 B4DGG1 531 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 PDE2AO00408 941 aaPredicted RBP16.08■□□□□ 0.16
VCX3A-201ENST00000381089 TNFRSF10CO14798 259 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 NUDT21O43809 227 aaKnown RBP16.08■□□□□ 0.16
VCX3A-201ENST00000381089 PRAMEF10O60809 474 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 ELFN1P0C7U0 828 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 ITIH1P19827 911 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 HTR7P34969 479 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 RFC1P35251 1148 aaPredicted RBP16.08■□□□□ 0.16
VCX3A-201ENST00000381089 SOX5P35711 763 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 POLR2LP62875 67 aaKnown RBP16.08■□□□□ 0.16
VCX3A-201ENST00000381089 CYTH1Q15438 398 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 TCP11X2Q5H9J9 407 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 PYROXD2Q8N2H3 581 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 C3orf20Q8ND61 904 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 USP7Q93009 1102 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 SEMA3CQ99985 751 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 B3GNT4Q9C0J1 378 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 KLC2Q9H0B6 622 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 MOSPD1Q9UJG1 213 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 PCDHGA4Q9Y5G9 962 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 RNF215Q9Y6U7 377 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 NAV2Q8IVL1 2488 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 HECTD1Q9ULT8 2610 aa16.08■□□□□ 0.16
VCX3A-201ENST00000381089 LRRK1Q38SD2 2015 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 PPFIA2O75334 1257 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 HOXC4P09017 264 aaPredicted RBP16.07■□□□□ 0.16
VCX3A-201ENST00000381089 FAM87AP0C7U9 286 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 UNGP13051 313 aaPredicted RBP16.07■□□□□ 0.16
VCX3A-201ENST00000381089 STAT1P42224 750 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 NDST2P52849 883 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 TPI1P60174 286 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 POLR2FP61218 127 aaKnown RBP16.07■□□□□ 0.16
VCX3A-201ENST00000381089 BIRC2Q13490 618 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 HLTFQ14527 1009 aaKnown RBP eCLIP16.07■□□□□ 0.16
VCX3A-201ENST00000381089 DPCR1Q3MIW9 517 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 SPECC1LQ69YQ0 1117 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 WDR59Q6PJI9 974 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 PIM3Q86V86 326 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 CAMK1DQ8IU85 385 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 OR1E3Q8WZA6 343 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 FUBP1Q96AE4 644 aaKnown RBP16.07■□□□□ 0.16
VCX3A-201ENST00000381089 TRIM4Q9C037 500 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 WDR26Q9H7D7 661 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 SCN8AQ9UQD0 1980 aa16.07■□□□□ 0.16
VCX3A-201ENST00000381089 TMEM202A6NGA9 273 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 ARHGAP42A6NI28 874 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 SIGLEC16A6NMB1 481 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 AGRPO00253 132 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 TERTO14746 1132 aaKnown RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 PALMO75781 387 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 RECQL5O94762 991 aaPredicted RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 CPNE6O95741 557 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 MBD3O95983 291 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 CHRNB2P17787 502 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 CSNK1DP48730 415 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 ATP1A2P50993 1020 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 ZNF143P52747 638 aaPredicted RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 BCL2L1Q07817 233 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 SRSF6Q13247 344 aaKnown RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 PEX6Q13608 980 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 CLPPQ16740 277 aaPredicted RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 CT47A1Q5JQC4 288 aaPredicted RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 SRLQ86TD4 932 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 VASH2Q86V25 355 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 ZFAND4Q86XD8 727 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 PHF13Q86YI8 300 aaPredicted RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 PLA2G15Q8NCC3 412 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 CINPQ9BW66 212 aaPredicted RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 TMEM168Q9H0V1 697 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 GANQ9H2C0 597 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 CYP4F12Q9HCS2 524 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 FGF22Q9HCT0 170 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms