RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 MCCC1Q96RQ3 725 aaPredicted RBP18.88■□□□□ 0.61
SMN2-202ENST00000380742 BTBD1Q9H0C5 482 aa18.88■□□□□ 0.61
SMN2-202ENST00000380742 DPH5Q9H2P9 285 aa18.88■□□□□ 0.61
SMN2-202ENST00000380742 ARNT2Q9HBZ2 717 aa18.88■□□□□ 0.61
SMN2-202ENST00000380742 WSB2Q9NYS7 404 aaPredicted RBP18.88■□□□□ 0.61
SMN2-202ENST00000380742 B4GALT6Q9UBX8 382 aa18.88■□□□□ 0.61
SMN2-202ENST00000380742 THADAQ6YHU6 1953 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 A0A0U1RQS6 177 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 NPIPB15A6NHN6 443 aaPredicted RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 A8MX80 341 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 TP73O15350 636 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 AP1G1O43747 822 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 FGF1P05230 155 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 PIRTP0C851 137 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 CD6P30203 668 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 OXTRP30559 389 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 MMP12P39900 470 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 TNNT3P45378 269 aaPredicted RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 RALGDSQ12967 914 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 MSLNQ13421 630 aaPredicted RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 ZNF528Q3MIS6 628 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 GLE1Q53GS7 698 aaKnown RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 USP39Q53GS9 565 aaKnown RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 ZNF534Q76KX8 674 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 LINC00523Q86TU6 105 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 PPIL6Q8IXY8 311 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 OR52K1Q8NGK4 314 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 SNF8Q96H20 258 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 RAB17Q9H0T7 212 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 SGK2Q9HBY8 427 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 CASS4Q9NQ75 786 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 PIH1D1Q9NWS0 290 aaKnown RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 DMGDHQ9UI17 866 aaKnown RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 MBD1Q9UIS9 605 aaPredicted RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 UTP11Q9Y3A2 253 aaKnown RBP18.87■□□□□ 0.61
SMN2-202ENST00000380742 SPO11Q9Y5K1 396 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 CUL9Q8IWT3 2517 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 ABCA7Q8IZY2 2146 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 PLXNA2O75051 1894 aa18.87■□□□□ 0.61
SMN2-202ENST00000380742 CAPN8A6NHC0 703 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 BHMG1C9JSJ3 638 aaPredicted RBP18.86■□□□□ 0.61
SMN2-202ENST00000380742 SEC31AO94979 1220 aaKnown RBP18.86■□□□□ 0.61
SMN2-202ENST00000380742 HEXIM1O94992 359 aaKnown RBP18.86■□□□□ 0.61
SMN2-202ENST00000380742 ITGA8P53708 1063 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 CDK16Q00536 496 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 ELP6Q0PNE2 266 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 TRADDQ15628 312 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 TMEM52BQ4KMG9 183 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 ERAP2Q6P179 960 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 USP45Q70EL2 814 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 DPPA4Q7L190 304 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 PCGF5Q86SE9 256 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 TSPAN33Q86UF1 283 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 NDUFAF2Q8N183 169 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 LYSMD1Q96S90 227 aa18.86■□□□□ 0.61
SMN2-202ENST00000380742 FAM126AQ9BYI3 521 aaPredicted RBP18.86■□□□□ 0.61
SMN2-202ENST00000380742 BPTFQ12830 3046 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 FAM47DPA6NHR8 397 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 SLU7O95391 586 aaKnown RBP18.85■□□□□ 0.61
SMN2-202ENST00000380742 SEMA4FO95754 770 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 TPH1P17752 444 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 BCKDHBP21953 392 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 LHCGRP22888 699 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 VIPR1P32241 457 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 SRSF5Q13243 272 aaKnown RBP18.85■□□□□ 0.61
SMN2-202ENST00000380742 CDKN3Q16667 212 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 HIBCHQ6NVY1 386 aaPredicted RBP18.85■□□□□ 0.61
SMN2-202ENST00000380742 CRTC1Q6UUV9 634 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 PPP1R21Q6ZMI0 780 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 MCUQ8NE86 351 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 GPR174Q9BXC1 333 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 KDM4CQ9H3R0 1056 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 MAGEE1Q9HCI5 957 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 GRHL1Q9NZI5 618 aa18.85■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3DA0A087WVF3 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3IA0A087WXS9 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3EA0A087X179 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3KA0A087X1G2 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 ESYT3A0FGR9 886 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3FA6NER0 549 aaPredicted RBP18.84■□□□□ 0.61
SMN2-202ENST00000380742 PRR23AA6NEV1 266 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 C10orf142B7Z368 130 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3LB9A6J9 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 GOLGA8MH3BSY2 632 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 NEMP1O14524 444 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 AURKAO14965 403 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TSPAN6O43657 245 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 PCDH8O95206 1070 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3HP0C7X1 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 CYP2A6P11509 494 aaPredicted RBP18.84■□□□□ 0.61
SMN2-202ENST00000380742 NFKBIAP25963 317 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 GUCY2DQ02846 1103 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 CDH17Q12864 832 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 MORF4L2Q15014 288 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3GQ6DHY5 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3CQ6IPX1 549 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 LRRC8BQ6P9F7 803 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 CAND1Q86VP6 1230 aaKnown RBP18.84■□□□□ 0.61
SMN2-202ENST00000380742 HOOK3Q86VS8 718 aa18.84■□□□□ 0.61
SMN2-202ENST00000380742 TBC1D3Q8IZP1 549 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms