RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 MIPP30301 263 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 TYRO3Q06418 890 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 RALGDSQ12967 914 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 MTM1Q13496 603 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 CCDC183Q5T5S1 534 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 ATL2Q8NHH9 583 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 WDR36Q8NI36 951 aaKnown RBP16.96■□□□□ 0.31
SMN2-201ENST00000380741 CCDC74AQ96AQ1 378 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 ECHDC3Q96DC8 303 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 PDXPQ96GD0 296 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 WDR92Q96MX6 357 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 CINPQ9BW66 212 aaPredicted RBP16.96■□□□□ 0.31
SMN2-201ENST00000380741 DPH1Q9BZG8 443 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 HAUS4Q9H6D7 363 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.31
SMN2-201ENST00000380741 GPR34Q9UPC5 381 aa16.96■□□□□ 0.31
SMN2-201ENST00000380741 UNC13CQ8NB66 2214 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 CDRT15L2A8MXV6 281 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 GOLGA6L22H0YM25 854 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 PRPSAP2O60256 369 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 RNF8O76064 485 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 RECQL5O94762 991 aaPredicted RBP16.95■□□□□ 0.3
SMN2-201ENST00000380741 SKOR1P84550 965 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 BCL2L1Q07817 233 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 ASIC2Q16515 512 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 ARHGAP40Q5TG30 622 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 E4F1Q66K89 784 aaPredicted RBP16.95■□□□□ 0.3
SMN2-201ENST00000380741 ZNF571Q7Z3V5 609 aaPredicted RBP16.95■□□□□ 0.3
SMN2-201ENST00000380741 GKN2Q86XP6 184 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 TP53INP2Q8IXH6 220 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 SDR16C5Q8N3Y7 309 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 FNIP1Q8TF40 1166 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 NSMCE3Q96MG7 304 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 RBM15Q96T37 977 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMN2-201ENST00000380741 DGKBQ9Y6T7 804 aa16.95■□□□□ 0.3
SMN2-201ENST00000380741 ZNF462Q96JM2 2506 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 CCDC187A0A096LP49 1063 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 CFAP69A5D8W1 941 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 TMEM202A6NGA9 273 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 ERVH48-1M5A8F1 160 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 TRAFD1O14545 582 aaPredicted RBP16.94■□□□□ 0.3
SMN2-201ENST00000380741 LRCH4O75427 683 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 TNFSF15O95150 251 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 MBD3O95983 291 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 FTLP02792 175 aaPredicted RBP16.94■□□□□ 0.3
SMN2-201ENST00000380741 ELFN1P0C7U0 828 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 GM2AP17900 193 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 IL10RBQ08334 325 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 NSUN2Q08J23 767 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMN2-201ENST00000380741 DPYSQ14117 519 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 RFTN1Q14699 578 aaPredicted RBP16.94■□□□□ 0.3
SMN2-201ENST00000380741 ANO6Q4KMQ2 910 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 LIPIQ6XZB0 460 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 DPPA4Q7L190 304 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 B3GNT8Q7Z7M8 397 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 ARL14Q8N4G2 192 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 PAF1Q8N7H5 531 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 OR1E3Q8WZA6 343 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 FUBP1Q96AE4 644 aaKnown RBP16.94■□□□□ 0.3
SMN2-201ENST00000380741 ZNF653Q96CK0 615 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMN2-201ENST00000380741 FGF22Q9HCT0 170 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 CWC15Q9P013 229 aaKnown RBP16.94■□□□□ 0.3
SMN2-201ENST00000380741 CNOT8Q9UFF9 292 aaKnown RBP16.94■□□□□ 0.3
SMN2-201ENST00000380741 SSUH2Q9Y2M2 353 aa16.94■□□□□ 0.3
SMN2-201ENST00000380741 ARHGEF17Q96PE2 2063 aaPredicted RBP16.93■□□□□ 0.3
SMN2-201ENST00000380741 SCN8AQ9UQD0 1980 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 A0A1W2PQM1 296 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 D6RAR5 112 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 CACNB4O00305 520 aaPredicted RBP16.93■□□□□ 0.3
SMN2-201ENST00000380741 DDX3XO00571 662 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMN2-201ENST00000380741 TNFP01375 233 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 GZMAP12544 262 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 SCNN1BP51168 640 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 KIAA1024LP59773 190 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 AP1S1P61966 158 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 CCL7P80098 99 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 CLEC14AQ86T13 490 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 PSTKQ8IV42 348 aaKnown RBP16.93■□□□□ 0.3
SMN2-201ENST00000380741 ZNF843Q8N446 348 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 OR56A4Q8NGH8 313 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 LIN37Q96GY3 246 aaPredicted RBP16.93■□□□□ 0.3
SMN2-201ENST00000380741 PSKH2Q96QS6 385 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 GFM1Q96RP9 751 aaKnown RBP16.93■□□□□ 0.3
SMN2-201ENST00000380741 NAT10Q9H0A0 1025 aaKnown RBP16.93■□□□□ 0.3
SMN2-201ENST00000380741 MRPL40Q9NQ50 206 aaKnown RBP16.93■□□□□ 0.3
SMN2-201ENST00000380741 AIPL1Q9NZN9 384 aa16.93■□□□□ 0.3
SMN2-201ENST00000380741 TTC24A2A3L6 582 aaPredicted RBP16.92■□□□□ 0.3
SMN2-201ENST00000380741 A8MX80 341 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 RPLP0P05388 317 aaKnown RBP16.92■□□□□ 0.3
SMN2-201ENST00000380741 ITGA2BP08514 1039 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 PRKCIP41743 596 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 MLLT3P42568 568 aaPredicted RBP16.92■□□□□ 0.3
SMN2-201ENST00000380741 HCAR3P49019 387 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 ZNF135P52742 658 aaPredicted RBP16.92■□□□□ 0.3
SMN2-201ENST00000380741 POLR2LP62875 67 aaKnown RBP16.92■□□□□ 0.3
SMN2-201ENST00000380741 RHDQ02161 417 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 SLC10A7Q0GE19 358 aa16.92■□□□□ 0.3
SMN2-201ENST00000380741 LBRQ14739 615 aaKnown RBP16.92■□□□□ 0.3
SMN2-201ENST00000380741 TAF1BQ53T94 588 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms