RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PMF1-BGLAPU3KQ54 211 aa7.53□□□□□ -1.2
CDKL5-201ENST00000379989 LRRC72A6NJI9 287 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 GOLGA8SH3BPF8 625 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 STX16-NPEPL1H3BU86 382 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 K7ENM7 598 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 NOS1APO75052 506 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 UGT2B11O75310 529 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 RETP07949 1114 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 TMEM191BP0C7N4 346 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 SUPT20HL2P0C7V6 817 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ETS1P14921 441 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ATF7P17544 494 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 CYP3A5P20815 502 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ME2P23368 584 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 HTR3AP46098 478 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 HLCSP50747 726 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 NME5P56597 212 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MGAT3Q09327 533 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 KLF10Q13118 480 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 SLC36A3Q495N2 470 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MSS51Q4VC12 460 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 VWA5B1Q5TIE3 1220 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ATF7IP2Q5U623 682 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ANGEL2Q5VTE6 544 aaKnown RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 STEAP3Q658P3 488 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ABHD15Q6UXT9 468 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 NSMFQ6X4W1 530 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 WDR49Q8IV35 697 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 OFCC1Q8IZS5 231 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 FAM156AQ8NDB6 213 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 PJA1Q8NG27 643 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 FANK1Q8TC84 345 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 SLCO4A1Q96BD0 722 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 BTN2A3PQ96KV6 586 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MFSD14AQ96MC6 490 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 TAAR1Q96RJ0 339 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ZHX3Q9H4I2 956 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 NPAP1Q9NZP6 1156 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 PCDH10Q9P2E7 1040 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 SNX7Q9UNH6 387 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 KIAA1217Q5T5P2 1943 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 PDZK1P1A8MUH7 402 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 AXIN1O15169 862 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 CDK14O94921 469 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 S100A6P06703 90 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MAGP20916 626 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 EEF1B2P24534 225 aaKnown RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 HNF1BP35680 557 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 PPP5CP53041 499 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MFAP3P55082 362 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MERTKQ12866 999 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 SP140Q13342 867 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 SLC12A1Q13621 1099 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MFSD13AQ14CX5 517 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MORF4L2Q15014 288 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 HIST2H2ACQ16777 129 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 RNASEH2BQ5TBB1 312 aaKnown RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF544Q6NX49 715 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 C16orf89Q6UX73 402 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 CTAGE3PQ8IX95 158 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 LRRC71Q8N4P6 559 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MFSD2AQ8NA29 543 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ZFPM2Q8WW38 1151 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 FBXW5Q969U6 566 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 LENG8Q96PV6 779 aaPredicted RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 FUNDC2Q9BWH2 189 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 MIR1-1HGQ9H1L0 117 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 TMEM8AQ9HCN3 771 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 FBXO28Q9NVF7 368 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 XPO7Q9UIA9 1087 aaKnown RBP7.52□□□□□ -1.21
CDKL5-201ENST00000379989 ZNF175Q9Y473 711 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 OTOFQ9HC10 1997 aa7.52□□□□□ -1.21
CDKL5-201ENST00000379989 TRPC5OSA6NMA1 111 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CFLARO15519 480 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 EXTL3O43909 919 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 SYNCRIPO60506 623 aaKnown RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PTTG1O95997 202 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 KRT7P08729 469 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CLEC2LP0C7M8 214 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 RALAP11233 206 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PSKH1P11801 424 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 MYL4P12829 197 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TCN1P20061 433 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ST13P50502 369 aaKnown RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 VAMP7P51809 220 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CDC42EP1Q00587 391 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 SLC10A2Q12908 348 aaPredicted RBP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 GPS1Q13098 491 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 LAMC2Q13753 1193 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PCBP1Q15365 356 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDKL5-201ENST00000379989 TMEM65Q6PI78 240 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ARSKQ6UWY0 536 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ABRAXAS1Q6UWZ7 409 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ZPBP2Q6X784 338 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 ARCQ7LC44 396 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 PLPPR4Q7Z2D5 763 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 FAM9CQ8IZT9 166 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 CHCHD4Q8N4Q1 142 aa7.51□□□□□ -1.21
CDKL5-201ENST00000379989 KYQ8NBH2 561 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms