RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 GRM3Q14832 879 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 KIZQ2M2Z5 673 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TMEM214Q6NUQ4 689 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SLC27A1Q6PCB7 646 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PDIK1LQ8N165 341 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SLC15A4Q8N697 577 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 DEPTORQ8TB45 409 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 RSAD2Q8WXG1 361 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 COG8Q96MW5 612 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 NSUN5Q96P11 429 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 OLFM3Q96PB7 478 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 CGRRF1Q99675 332 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 FZD8Q9H461 694 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PLEKHA5Q9HAU0 1116 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SCUBE2Q9NQ36 999 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TSPAN16Q9UKR8 245 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 COMMD3-BMI1R4GMX3 469 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SEC24DO94855 1032 aaPredicted RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TTC39BQ5VTQ0 682 aaPredicted RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ACOT1Q86TX2 421 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 RBM23Q86U06 439 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ITIH5Q86UX2 942 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 FNDC8Q8TC99 324 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 WNT8BQ93098 351 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TMA16Q96EY4 203 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 OSBPL11Q9BXB4 747 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 BCO2Q9BYV7 579 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TUBB1Q9H4B7 451 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 QPCTLQ9NXS2 382 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PDP2Q9P2J9 529 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TMEM189-UBE2V1I3L0A0 370 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ACKR2O00590 384 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 DLX3O60479 287 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PENKP01210 267 aaPredicted RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 GSTA2P09210 222 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 CPB1P15086 417 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ATP5DP30049 168 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SHMT2P34897 504 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 MAGEA12P43365 314 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 CLCQ05315 142 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 CATSPEREQ5SY80 951 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SLFN12LQ6IEE8 588 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 KCTD4Q8WVF5 259 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ISOC1Q96CN7 298 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 HERC2P3Q9BVR0 1158 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 NEU3Q9UQ49 428 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TNFSF13BQ9Y275 285 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ZNF711Q9Y462 761 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 V9GYQ6 96 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TP53BP1Q12888 1972 aaPredicted RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SPECC1L-ADORA2AF8WAN1 911 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 CILPO75339 1184 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SNRPAP09012 282 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ADARP55265 1226 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 FAM214AQ32MH5 1076 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 LEXMQ3ZCV2 418 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 LRRC23Q53EV4 343 aaPredicted RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 OTOP3Q7RTS5 596 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ADGRG6Q86SQ4 1221 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 PIM3Q86V86 326 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 UBE2FQ969M7 185 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 FUBP1Q96AE4 644 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 EME1Q96AY2 570 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 CSPG4P5Q96PW8 444 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ADAM2Q99965 735 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 COLEC11Q9BWP8 271 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 MRPL4Q9BYD3 311 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 RNF39Q9H2S5 420 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 TTYH1Q9H313 450 aaPredicted RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 RPF2Q9H7B2 306 aaKnown RBP7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 NRDE2Q9H7Z3 1164 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 THAP1Q9NVV9 213 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 SPG21Q9NZD8 308 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 ZNF225Q9UK10 706 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 DTNAQ9Y4J8 743 aa7.41□□□□□ -1.22
GPCPD1-201ENST00000379019 KANSL1LA0AUZ9 987 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 H7C0C1 242 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 TRIM24O15164 1050 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 AHSGP02765 367 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 C2P06681 752 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 KRT19P08727 400 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 CTSHP09668 335 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 PDGFRAP16234 1089 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 HOXB8P17481 243 aaPredicted RBP7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 TFEBP19484 476 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 GARTP22102 1010 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 ATP5OP48047 213 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 BCAT1P54687 386 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 ABCE1P61221 599 aaKnown RBP7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 AP2B1P63010 937 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 MVKQ03426 396 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 SOX4Q06945 474 aaPredicted RBP7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 GPM6BQ13491 265 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 C8orf82Q6P1X6 216 aaPredicted RBP7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 PAQR9Q6ZVX9 377 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 FAM47BQ8NA70 645 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 P2RY11Q96G91 374 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 B3GALT6Q96L58 329 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 OLFM1Q99784 485 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms