RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 NSMCE4AQ9NXX6 385 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 CDH7Q9ULB5 785 aa16.7■□□□□ 0.26
PCDHA1-201ENST00000378133 TCRBV3S1A0A5B6 114 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 PRORSD1PA6NEY8 169 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 SERPINB7O75635 380 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 STAMBPO95630 424 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 PGK1P00558 417 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 F9P00740 461 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 TRAP1Q12931 704 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 RAB41Q5JT25 222 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 PCID2Q5JVF3 399 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 LDLRAD1Q5T700 205 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 KDELC2Q7Z4H8 507 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 LINC00523Q86TU6 105 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 NPLOC4Q8TAT6 608 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 PLEKHA8Q96JA3 519 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 CNOT6Q9ULM6 557 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 FUOMA2VDF0 154 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 TRIM43BA6NCK2 446 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 AKAP10O43572 662 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 GNAO1P09471 354 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 ZNF12P17014 697 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 NAT1P18440 290 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 CXCR3P49682 368 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 RAB10P61026 200 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 SPIDRQ14159 915 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 MFSD10Q14728 455 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 EML3Q32P44 896 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 TSTD2Q5T7W7 516 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 DCDC5Q6ZRR9 648 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 BHLHA9Q7RTU4 235 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 DQX1Q8TE96 717 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 STON2Q8WXE9 905 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 ZNF419Q96HQ0 510 aaPredicted RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 GPR78Q96P69 363 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 UHRF1Q96T88 793 aaPredicted RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 SLC2A6Q9UGQ3 507 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 PTBP2Q9UKA9 531 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 FAM95CA0A1B0GW59 222 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 TRIM24O15164 1050 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 GSTM4Q03013 218 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 XKR5Q6UX68 686 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 LYSMD3Q7Z3D4 306 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 SLC15A3Q8IY34 581 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 KDM1BQ8NB78 822 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 RPF2Q9H7B2 306 aaKnown RBP16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 TRPC7Q9HCX4 862 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 FIS1Q9Y3D6 152 aa16.69■□□□□ 0.26
PCDHA1-201ENST00000378133 TRIM64CA6NLI5 447 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 HHLA1C9JL84 531 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ZBTB11O95625 1053 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 COL6A2P12110 1019 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 STMN1P16949 149 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ADAM17P78536 824 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 LRP8Q14114 963 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 GPR107Q5VW38 600 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 PM20D1Q6GTS8 502 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 C16orf87Q6PH81 154 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 DCLRE1AQ6PJP8 1040 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 TAC4Q86UU9 113 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ANKFN1Q8N957 763 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ADAMTS16Q8TE57 1224 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 GTF3C2Q8WUA4 911 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 TBL1YQ9BQ87 522 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 SPAG4Q9NPE6 437 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 CACNA2D2Q9NY47 1150 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 AAR2Q9Y312 384 aaKnown RBP16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 TRPC5OSA6NMA1 111 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ZNF839A8K0R7 811 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 H3BMQ9 156 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 AP3B1O00203 1094 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 FBP2O00757 339 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ARNTP27540 789 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 CLCNKBP51801 687 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 OGFOD2Q6N063 350 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 TNIP2Q8NFZ5 429 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 TBC1D15Q8TC07 691 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 DUS3LQ96G46 650 aaKnown RBP16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 COG8Q96MW5 612 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 NPLQ9BXD5 320 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 ATXN3LQ9H3M9 355 aa16.68■□□□□ 0.26
PCDHA1-201ENST00000378133 A0A1W2PPW3 197 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 NEMP2A6NFY4 417 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 SAC3D1A6NKF1 404 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 SDHDO14521 159 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 HNRNPLP14866 589 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 HDCP19113 662 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 ARCN1P48444 511 aaKnown RBP16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 LHX1P48742 406 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 OXCT1P55809 520 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 TAS2R39P59534 338 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 GRB14Q14449 540 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 UGP2Q16851 508 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 ELMO2Q96JJ3 720 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 FICDQ9BVA6 458 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 SMOXQ9NWM0 555 aa16.67■□□□□ 0.26
PCDHA1-201ENST00000378133 CCDC167Q9P0B6 97 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms