RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 CHSY3Q70JA7 882 aa24.12■■□□□ 1.45
SNX5-201ENST00000377759 PGAM4Q8N0Y7 254 aa24.12■■□□□ 1.45
SNX5-201ENST00000377759 GABPB2Q8TAK5 448 aaPredicted RBP24.12■■□□□ 1.45
SNX5-201ENST00000377759 GDPD5Q8WTR4 605 aa24.12■■□□□ 1.45
SNX5-201ENST00000377759 CCSER2Q9H7U1 834 aa24.12■■□□□ 1.45
SNX5-201ENST00000377759 CASQ2O14958 399 aaPredicted RBP24.11■■□□□ 1.45
SNX5-201ENST00000377759 PRAMEF11O60813 436 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 XRCC1P18887 633 aaPredicted RBP24.11■■□□□ 1.45
SNX5-201ENST00000377759 OR1E1P30953 314 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 C1QTNF8P60827 252 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 PRAMEP78395 509 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 TIAL1Q01085 375 aaKnown RBP eCLIP24.11■■□□□ 1.454e-6■■□□□ 13.2
SNX5-201ENST00000377759 GPR158Q5T848 1215 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 KLC3Q6P597 504 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 ISCA2Q86U28 154 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 CUZD1Q86UP6 607 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 PIM3Q86V86 326 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 HMGCLL1Q8TB92 370 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 PHF21BQ96EK2 531 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 SERPINI1Q99574 410 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.11■■□□□ 1.452e-6■□□□□ 9.9
SNX5-201ENST00000377759 MARCH5Q9NX47 278 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 TMEM161AQ9NX61 479 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 SCOCQ9UIL1 159 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 FIS1Q9Y3D6 152 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 CASP8AP2Q9UKL3 1982 aa24.11■■□□□ 1.45
SNX5-201ENST00000377759 MAP3K13O43283 966 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 FGFR3P22607 806 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 ZNF549Q6P9A3 640 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 RNF19BQ6ZMZ0 732 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 IFT43Q96FT9 208 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 VCXQ9H320 206 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 GSTO2Q9H4Y5 243 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 WDR41Q9HAD4 459 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 MEAF6Q9HAF1 191 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 HCSTQ9UBK5 93 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 UBTFL6P0CB48 400 aaPredicted RBP24.1■■□□□ 1.45
SNX5-201ENST00000377759 HSPA1AP0DMV8 641 aaKnown RBP24.1■■□□□ 1.45
SNX5-201ENST00000377759 HSPA1BP0DMV9 641 aaKnown RBP24.1■■□□□ 1.45
SNX5-201ENST00000377759 GATMP50440 423 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 PKNOX1P55347 436 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 YBEYP58557 167 aaPredicted RBP24.1■■□□□ 1.45
SNX5-201ENST00000377759 RING1Q06587 406 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 MGAT5BQ3V5L5 792 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 PHC3Q8NDX5 983 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 PPP2R3CQ969Q6 453 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 GLT1D1Q96MS3 346 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 SEPT5Q99719 369 aaPredicted RBP24.1■■□□□ 1.45
SNX5-201ENST00000377759 KLHL4Q9C0H6 718 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 EFCAB1Q9HAE3 211 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 PDFQ9HBH1 243 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 CRYL1Q9Y2S2 319 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 ARL5AQ9Y689 179 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 GREB1Q4ZG55 1949 aa24.1■■□□□ 1.45
SNX5-201ENST00000377759 STX16-NPEPL1H3BU86 382 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 UBFD1O14562 309 aaKnown RBP24.09■■□□□ 1.45
SNX5-201ENST00000377759 ZDHHC11BP0C7U3 371 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 ENO3P13929 434 aaPredicted RBP24.09■■□□□ 1.45
SNX5-201ENST00000377759 MSX2P35548 267 aaPredicted RBP24.09■■□□□ 1.45
SNX5-201ENST00000377759 MS4A2Q01362 244 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 RFTN1Q14699 578 aaPredicted RBP24.09■■□□□ 1.45
SNX5-201ENST00000377759 DNAJC1Q96KC8 554 aaKnown RBP24.09■■□□□ 1.45
SNX5-201ENST00000377759 SPATA17Q96L03 361 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 NPAS2Q99743 824 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 POLR1EQ9GZS1 481 aaKnown RBP24.09■■□□□ 1.45
SNX5-201ENST00000377759 ALG9Q9H6U8 611 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 CFLARO15519 480 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 TBC1D4O60343 1298 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 LYNP07948 512 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 TACR2P21452 398 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 SLC26A3P40879 764 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 MAPKAPK2P49137 400 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 KCNQ1P51787 676 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 GPR17Q13304 367 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 SEMA3AQ14563 771 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 USP13Q92995 863 aaPredicted RBP24.09■■□□□ 1.45
SNX5-201ENST00000377759 PTERQ96BW5 349 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 FEM1CQ96JP0 617 aa24.09■■□□□ 1.45
SNX5-201ENST00000377759 GOT2P00505 430 aaKnown RBP24.08■■□□□ 1.45
SNX5-201ENST00000377759 IMPDH1P20839 514 aa24.08■■□□□ 1.45
SNX5-201ENST00000377759 GALNT1Q10472 559 aaPredicted RBP24.08■■□□□ 1.45
SNX5-201ENST00000377759 EML3Q32P44 896 aa24.08■■□□□ 1.45
SNX5-201ENST00000377759 CYHR1Q6ZMK1 362 aa24.08■■□□□ 1.45
SNX5-201ENST00000377759 GK5Q6ZS86 529 aa24.08■■□□□ 1.45
SNX5-201ENST00000377759 SLC22A9Q8IVM8 553 aa24.08■■□□□ 1.45
SNX5-201ENST00000377759 FAR2Q96K12 515 aa24.08■■□□□ 1.45
SNX5-201ENST00000377759 EML4Q9HC35 981 aaKnown RBP24.08■■□□□ 1.45
SNX5-201ENST00000377759 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.08■■□□□ 1.452e-7■■□□□ 14.1
SNX5-201ENST00000377759 ACTL7AQ9Y615 435 aa24.08■■□□□ 1.45
SNX5-201ENST00000377759 FDXRP22570 491 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 AQP4P55087 323 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 GALNT3Q14435 633 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 TRIP10Q15642 601 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 PPP1R3AQ16821 1122 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 CFAP52Q8N1V2 620 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 BLOC1S5Q8TDH9 187 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 CASD1Q96PB1 797 aa24.08■■□□□ 1.44
SNX5-201ENST00000377759 DDX50Q9BQ39 737 aaKnown RBP24.08■■□□□ 1.44
SNX5-201ENST00000377759 POLR3BQ9NW08 1133 aaPredicted RBP24.08■■□□□ 1.44
SNX5-201ENST00000377759 PSMD13Q9UNM6 376 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms