RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 WRAP53Q9BUR4 548 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 DPEP3Q9H4B8 488 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 MAT2BQ9NZL9 334 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 AP3M1Q9Y2T2 418 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 RAI2Q9Y5P3 530 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 BCLAF3A2AJT9 711 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 CST3P01034 146 aaPredicted RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 PROCP04070 461 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 SHBGP04278 402 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 ITGA2BP08514 1039 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 RPL3P39023 403 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 HK2P52789 917 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 ADRM1Q16186 407 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 OTOP3Q7RTS5 596 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 C12orf56Q8IXR9 622 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 GPR135Q8IZ08 494 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 HEXDCQ8WVB3 486 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 ANGPT4Q9Y264 503 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 A0A0U1RQJ8 604 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 GPR25O00155 361 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 OR6B1O95007 311 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 LRATO95237 230 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 HNRNPH1P31943 449 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 RALGDSQ12967 914 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 TRIM32Q13049 653 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 MTAPQ13126 283 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 SF1Q15637 639 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 CCL14Q16627 93 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 ARMCX4Q5H9R4 360 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 VARS2Q5ST30 1063 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 ZDHHC20Q5W0Z9 365 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 CDC73Q6P1J9 531 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 BEND7Q8N7W2 519 aaPredicted RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 ZNF398Q8TD17 642 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 KREMEN1Q96MU8 473 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 C11orf49Q9H6J7 331 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 INTS7Q9NVH2 962 aaKnown RBP13.67□□□□□ -0.22
GPC6-201ENST00000377047 STMN3Q9NZ72 180 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 FBXO5Q9UKT4 447 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 TBC1D30Q9Y2I9 924 aa13.67□□□□□ -0.22
GPC6-201ENST00000377047 C3P01024 1663 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 NPEPPSL1A6NEC2 478 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 PIAS1O75925 651 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 C4BPAP04003 597 aaKnown RBP13.66□□□□□ -0.22
GPC6-201ENST00000377047 LINC00032P0C843 101 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ADRA1BP35368 520 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 NUP62P37198 522 aaPredicted RBP13.66□□□□□ -0.22
GPC6-201ENST00000377047 ELP6Q0PNE2 266 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 SQLEQ14534 574 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 CERCAMQ5T4B2 595 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 GCNT7Q6ZNI0 430 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ARL14EPQ8N8R7 260 aaPredicted RBP13.66□□□□□ -0.22
GPC6-201ENST00000377047 LRRN4CLQ8ND94 238 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 C19orf18Q8NEA5 215 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 MOSPD2Q8NHP6 518 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 SNX27Q96L92 541 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 LRRC19Q9H756 370 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 CD84Q9UIB8 345 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 FAM237AA0A1B0GTK4 181 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ERN1O75460 977 aaKnown RBP13.66□□□□□ -0.22
GPC6-201ENST00000377047 MAPKAPK3Q16644 382 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ZNF549Q6P9A3 640 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 RINLQ6ZS11 566 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ADGRG2Q8IZP9 1017 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 OR52L1Q8NGH7 329 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 CLEC4DQ8WXI8 215 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 TIFAQ96CG3 184 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 KCNK4Q9NYG8 393 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 SMIM31A0A1B0GVY4 71 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ENO4A6NNW6 628 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 BTNL10A8MVZ5 291 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 WBP4O75554 376 aaKnown RBP13.66□□□□□ -0.22
GPC6-201ENST00000377047 ZNF280AP59817 542 aaPredicted RBP13.66□□□□□ -0.22
GPC6-201ENST00000377047 ATP6V0D1P61421 351 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 COX10Q12887 443 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 TRAF7Q6Q0C0 670 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ZDHHC13Q8IUH4 622 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 SVOPQ8N4V2 548 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 SETD9Q8NE22 299 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 PWWP2AQ96N64 755 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 MBOAT7Q96N66 472 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 SPATA5L1Q9BVQ7 753 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 TMEM191CA6NGB0 347 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 CLOCKO15516 846 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 CBX6O95503 412 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 VIPP01282 170 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 TSPAN19P0C672 248 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 PTSQ03393 145 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 C1orf50Q9BV19 199 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 MKL2Q9ULH7 1088 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 AOC2O75106 756 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 KRT75O95678 551 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 POTEHQ6S545 545 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 KRT77Q7Z794 578 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 CD101Q93033 1021 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 FGFBP2Q9BYJ0 223 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms