RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ZFRQ96KR1 1074 aaKnown RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 GSTO2Q9H4Y5 243 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 SPAG4Q9NPE6 437 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 OSER1Q9NX31 292 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 MGEA5O60502 916 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 RENBPP51606 427 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 CLCN2P51788 898 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 MLLT6P55198 1093 aaPredicted RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 MGAT5BQ3V5L5 792 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 RBM44Q6ZP01 1051 aaKnown RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 LDB1Q86U70 411 aaPredicted RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 SNX31Q8N9S9 440 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 PRPF18Q99633 342 aaKnown RBP25.41■■□□□ 1.66
C9orf40-201ENST00000376854 ALG9Q9H6U8 611 aa25.41■■□□□ 1.66
C9orf40-201ENST00000376854 A0A1W2PQH9 124 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 UBFD1O14562 309 aaKnown RBP25.4■■□□□ 1.66
C9orf40-201ENST00000376854 TNPO2O14787 897 aaKnown RBP25.4■■□□□ 1.66
C9orf40-201ENST00000376854 GPR182O15218 404 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 ATP6V1B1P15313 513 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 ZNF26P17031 533 aaPredicted RBP25.4■■□□□ 1.66
C9orf40-201ENST00000376854 RHDQ02161 417 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 ARMC3Q5W041 872 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 CLEC6AQ6EIG7 209 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 TFAP2DQ7Z6R9 452 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 RASAL3Q86YV0 1011 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 METTL25Q8N6Q8 603 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 OR6P1Q8NGX9 317 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 LPGAT1Q92604 370 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 MTG1Q9BT17 334 aaPredicted RBP25.4■■□□□ 1.66
C9orf40-201ENST00000376854 SEMA6AQ9H2E6 1030 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 AK5Q9Y6K8 562 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 PRORSD1PA6NEY8 169 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 WASH4PA8MWX3 477 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 IMPDH1P20839 514 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 ZNF157P51786 506 aaPredicted RBP25.4■■□□□ 1.66
C9orf40-201ENST00000376854 CDKN2DP55273 166 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.4■■□□□ 1.66
C9orf40-201ENST00000376854 NADK2Q4G0N4 442 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 PIK3R6Q5UE93 754 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 FAM219BQ5XKK7 198 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 SERPINB11Q96P15 392 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 KLHL5Q96PQ7 755 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 SLC25A23Q9BV35 468 aa25.4■■□□□ 1.66
C9orf40-201ENST00000376854 J3KR12 359 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 CCL22O00626 93 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 MRASO14807 208 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 DUSP11O75319 330 aaKnown RBP25.39■■□□□ 1.66
C9orf40-201ENST00000376854 PAPSS2O95340 614 aaPredicted RBP25.39■■□□□ 1.66
C9orf40-201ENST00000376854 MT-CO1P00395 513 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 TSPAN8P19075 237 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 YWHAQP27348 245 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 CD52P31358 61 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 NRG1Q02297 640 aaPredicted RBP25.39■■□□□ 1.66
C9orf40-201ENST00000376854 TRAP1Q12931 704 aaKnown RBP25.39■■□□□ 1.66
C9orf40-201ENST00000376854 GPR158Q5T848 1215 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 TMEM207Q6UWW9 146 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 HMCESQ96FZ2 354 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 GRIP2Q9C0E4 1043 aa25.39■■□□□ 1.66
C9orf40-201ENST00000376854 MYOCOSA0A1B0GUC4 107 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 VILLO15195 856 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 SUPT7LO94864 414 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 MYCNP04198 464 aaPredicted RBP25.38■■□□□ 1.65
C9orf40-201ENST00000376854 ITGB1P05556 798 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 DSC2Q02487 901 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 SLC10A7Q0GE19 358 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 NRF1Q16656 503 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 MARC1Q5VT66 337 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 LAYNQ6UX15 382 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 GALNT7Q86SF2 657 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 LRTOMTQ8WZ04 291 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 HDAC10Q969S8 669 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 PABPC5Q96DU9 382 aaKnown RBP25.38■■□□□ 1.65
C9orf40-201ENST00000376854 TRMOQ9BU70 441 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 ZCWPW1Q9H0M4 648 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 VPS45Q9NRW7 570 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 A0A1B0GVG6 124 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 F8W810 466 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 SLC7A4O43246 635 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 CSPG5O95196 566 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 KCNC1P48547 511 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 SCN4BQ8IWT1 228 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 UMODL1-AS1Q8N2C9 162 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 OR9I1Q8NGQ6 314 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 C1orf74Q96LT6 269 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 MFSD1Q9H3U5 465 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 FNIP2Q9P278 1114 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 CD300AQ9UGN4 299 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 CROTQ9UKG9 612 aa25.38■■□□□ 1.65
C9orf40-201ENST00000376854 ATP6AP2A0A1C7CYW4 349 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 NRP2O60462 931 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 ATP6AP2O75787 350 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 ARSDP51689 593 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 PRAMEP78395 509 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 MGAT3Q09327 533 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 MAP7Q14244 749 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 ZNF678Q5SXM1 525 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 PIM3Q86V86 326 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 SLC2A11Q9BYW1 496 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 COQ10BQ9H8M1 238 aa25.37■■□□□ 1.65
C9orf40-201ENST00000376854 TTC24A2A3L6 582 aaPredicted RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms