RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 UBA2Q9UBT2 640 aaPredicted RBP11.73□□□□□ -0.53
DDR1-227ENST00000376570 TRMT6Q9UJA5 497 aaKnown RBP11.73□□□□□ -0.53
DDR1-227ENST00000376570 NPEPPSL1A6NEC2 478 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 K7ERQ8 282 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 DLX3O60479 287 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 NIPSNAP2O75323 286 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 TCEA3O75764 348 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 C1RP00736 705 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 ACADSP16219 412 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 KPNA2P52292 529 aaKnown RBP11.73□□□□□ -0.53
DDR1-227ENST00000376570 CASP9P55211 416 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 ZBTB6Q15916 424 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 RTP2Q5QGT7 225 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 MRNIPQ6NTE8 343 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 MON1AQ86VX9 555 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 ING5Q8WYH8 240 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 INPP5DQ92835 1189 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 CCDC90BQ9GZT6 254 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 DERAQ9Y315 318 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 VWA7Q9Y334 891 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 DTNAQ9Y4J8 743 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
DDR1-227ENST00000376570 HMX2A2RU54 273 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 H3BMM5 538 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 DPYSL4O14531 572 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 NCAM2O15394 837 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 LRATO95237 230 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 GOT2P00505 430 aaKnown RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 FGF3P11487 239 aaPredicted RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 ANPEPP15144 967 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 SLC11A1P49279 550 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 HECTD2Q5U5R9 776 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 SEPT8Q92599 483 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 VPS33AQ96AX1 596 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 ETAA1Q9NY74 926 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 FKBPLQ9UIM3 349 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 ATG2BQ96BY7 2078 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 INPP4BO15327 924 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 CDK18Q07002 472 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 TSNQ15631 228 aaKnown RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 ZIK1Q3SY52 487 aaPredicted RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 PIK3R6Q5UE93 754 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 CES4AQ5XG92 561 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 CAMK1DQ8IU85 385 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 CNDP1Q96KN2 507 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 GPR21Q99679 349 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 CDH19Q9H159 772 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 MRPL46Q9H2W6 279 aaKnown RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 HIPK3Q9H422 1215 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 RHOJQ9H4E5 214 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 FBXO44Q9H4M3 255 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 TMEM39AQ9NV64 488 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 WDR70Q9NW82 654 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 PRKAG3Q9UGI9 489 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 KANSL1LA0AUZ9 987 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 HEATR9A2RTY3 570 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 CCDC162PA2VCL2 907 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 E7ESA3 106 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 DCLK1O15075 740 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 OR1I1O60431 355 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 GDF5P43026 501 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 NR6A1Q15406 480 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 RALGPS2Q86X27 583 aaPredicted RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 MPP4Q96JB8 637 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 GRIP2Q9C0E4 1043 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 POLR1EQ9GZS1 481 aaKnown RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 CASS4Q9NQ75 786 aa11.72□□□□□ -0.53
DDR1-227ENST00000376570 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.72□□□□□ -0.53
DDR1-227ENST00000376570 HDAC3O15379 428 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 CHEK2O96017 543 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 SERPIND1P05546 499 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 PYGLP06737 847 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 NCK1P16333 377 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 RECQLP46063 649 aaPredicted RBP11.71□□□□□ -0.53
DDR1-227ENST00000376570 PKDCCQ504Y2 493 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 TIGD7Q6NT04 549 aaPredicted RBP11.71□□□□□ -0.53
DDR1-227ENST00000376570 IRGCQ6NXR0 463 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 LRRC8DQ7L1W4 858 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 SCD5Q86SK9 330 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 FBXO39Q8N4B4 442 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 VPS50Q96JG6 964 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 TUBGCP5Q96RT8 1024 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 THUMPD3Q9BV44 507 aaKnown RBP11.71□□□□□ -0.53
DDR1-227ENST00000376570 KATNBL1Q9H079 304 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 KRT87PA6NCN2 255 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 C2orf81A6NN90 581 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 MRASO14807 208 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 MAP3K13O43283 966 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 HGFP14210 728 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 RPL9P32969 192 aaKnown RBP11.71□□□□□ -0.53
DDR1-227ENST00000376570 GRIA3P42263 894 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
DDR1-227ENST00000376570 ZC3HC1Q86WB0 502 aaKnown RBP11.71□□□□□ -0.53
DDR1-227ENST00000376570 MFN1Q8IWA4 741 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 CPNE9Q8IYJ1 553 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 FNDC5Q8NAU1 212 aa11.71□□□□□ -0.53
DDR1-227ENST00000376570 SIDT2Q8NBJ9 832 aaKnown RBP11.71□□□□□ -0.53
DDR1-227ENST00000376570 NUDT8Q8WV74 236 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms