RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KIAA1257Q9ULG3 409 aa13□□□□□ -0.33
MSH5-204ENST00000375755 CFAP99D6REC4 459 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SBK3P0C264 359 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 ARSAP15289 507 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 LIMK2P53671 638 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 NME5P56597 212 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 TNK2Q07912 1038 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 OLIG2Q13516 323 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 HEATR6Q6AI08 1181 aaKnown RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 GALNT18Q6P9A2 607 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 B3GALNT2Q8NCR0 500 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 HMGCLL1Q8TB92 370 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CANT1Q8WVQ1 401 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 TCF12Q99081 682 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 ACE2Q9BYF1 805 aaPredicted RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 CEP41Q9BYV8 373 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SPC25Q9HBM1 224 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 ADAM28Q9UKQ2 775 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 TANC1Q9C0D5 1861 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SYNJ2BP-COX16A0A087WUM0 186 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 KRBA1A5PL33 1030 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SNAP91O60641 907 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CNOT3O75175 753 aaKnown RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 ESRRBO95718 433 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 BMP2P12643 396 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 NFKBIAP25963 317 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SPRP35270 261 aaPredicted RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 GRIA3P42263 894 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 PRKAA1Q13131 559 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 UNC93AQ86WB7 457 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 EPHX4Q8IUS5 362 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CRYBG2Q8N1P7 616 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 MFSD2AQ8NA29 543 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 ANKRD52Q8NB46 1076 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 KLHDC9Q8NEP7 349 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 URGCPQ8TCY9 931 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 TRUB1Q8WWH5 349 aaKnown RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 SENP8Q96LD8 212 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 GIN1Q9NXP7 522 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 COX16Q9P0S2 106 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 THSD7BQ9C0I4 1608 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 BPTFQ12830 3046 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 AQP9O43315 295 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 ITGB1P05556 798 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 HSPA1AP0DMV8 641 aaKnown RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 HSPA1BP0DMV9 641 aaKnown RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 MLLT10P55197 1068 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 TRAP1Q12931 704 aaKnown RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 LRP8Q14114 963 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 NEDD8Q15843 81 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SV2CQ496J9 727 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 LIPMQ5VYY2 423 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 KCTD8Q6ZWB6 473 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CHST15Q7LFX5 561 aaPredicted RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 LIMS2Q7Z4I7 341 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 IGFN1Q86VF2 1251 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 TMEM151AQ8N4L1 468 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 FBXL20Q96IG2 436 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CAPNS2Q96L46 248 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 EFHD1Q9BUP0 239 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CCDC68Q9H2F9 335 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CRTAC1Q9NQ79 661 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 RIC8BQ9NVN3 520 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CACNA2D2Q9NY47 1150 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 CD300AQ9UGN4 299 aa12.99□□□□□ -0.33
MSH5-204ENST00000375755 RBMX2Q9Y388 322 aaKnown RBP12.99□□□□□ -0.33
MSH5-204ENST00000375755 MYBPHLA2RUH7 354 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 TTKP33981 857 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 ADIGQ0VDE8 80 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
MSH5-204ENST00000375755 MERTKQ12866 999 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 ARHGAP17Q68EM7 881 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 ZYG11AQ6WRX3 759 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 HFE2Q6ZVN8 426 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 PIGZQ86VD9 579 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 OFCC1Q8IZS5 231 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 PYROXD2Q8N2H3 581 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 PBXIP1Q96AQ6 731 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 TAMM41Q96BW9 452 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 VTI1BQ9UEU0 232 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 A0A0A0MRY4 1105 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 C1orf232A0A0U1RR37 186 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 FAM149AA5PLN7 773 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 MPOP05164 745 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 POLBP06746 335 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 THP07101 528 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 BRCC3P46736 316 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 MAP3K7CLP57077 242 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 EML3Q32P44 896 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 PITRM1Q5JRX3 1037 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 C6orf183Q5T699 404 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 REP15Q6BDI9 236 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 LRRC8EQ6NSJ5 796 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms