RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SKIV2LQ15477 1246 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CBWD6Q4V339 395 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CBWD3Q5JTY5 395 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CBWD5Q5RIA9 395 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ERAP2Q6P179 960 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SLC47A1Q96FL8 570 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 C14orf105Q9NVL8 296 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 MAGED1Q9Y5V3 778 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 PTCH2Q9Y6C5 1203 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 POU6F1Q14863 301 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 FAM43BQ6ZT52 329 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ARMCX6Q7L4S7 300 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CADM1Q9BY67 442 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 RAP2AP10114 183 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 PIK3CBP42338 1070 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 MATKP42679 507 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 KLHL22Q53GT1 634 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 FBXO42Q6P3S6 717 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ITIH5Q86UX2 942 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CLHC1Q8NHS4 586 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 CREB3L1Q96BA8 519 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SP140LQ9H930 580 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF70Q9UC06 446 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF112Q9UJU3 913 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 FAM240BA0A1B0GVZ2 78 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SCNN1AP37088 669 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 GPD2P43304 727 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 VBP1P61758 197 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 EPC2Q52LR7 807 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 MACC1Q6ZN28 852 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SMYD1Q8NB12 490 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 SEC14L1Q92503 715 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 NARS2Q96I59 477 aaKnown RBP10.23□□□□□ -0.77
PTCH1-204ENST00000375290 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
PTCH1-204ENST00000375290 THP07101 528 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 S100GP29377 79 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SLC16A1P53985 500 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 TMEM132BQ14DG7 1078 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 EGFLAMQ63HQ2 1017 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 MEIOBQ8N635 442 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 C12orf66Q96MD2 445 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 COLEC11Q9BWP8 271 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 AXIN2Q9Y2T1 843 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 PCDHGB6Q9Y5F9 930 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SLC30A4O14863 429 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 GSTM1P09488 218 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 TKTL1P51854 596 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SNAPC2Q13487 334 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF181Q2M3W8 571 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 CERS6Q6ZMG9 384 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 OR6J1Q8NGC5 347 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 UBA3Q8TBC4 463 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 BCKDKO14874 412 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 APOL3O95236 402 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 TFRCP02786 760 aaKnown RBP10.22□□□□□ -0.77
PTCH1-204ENST00000375290 DGCR6Q14129 220 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 C16orf62Q7Z3J2 963 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 NECAB2Q7Z6G3 386 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ZSWIM2Q8NEG5 633 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF671Q8TAW3 534 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 TNFSF13BQ9Y275 285 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ZW10O43264 779 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 POU1F1P28069 291 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 LCP2Q13094 533 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 C10orf120Q5SQS8 335 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 CPNE9Q8IYJ1 553 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 APBA2Q99767 749 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 MKL2Q9ULH7 1088 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 LOC100506127A0A0U1RQW1 187 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SERPINA3P01011 423 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 HGFP14210 728 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ARPP19P56211 112 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ZFPM1Q8IX07 1006 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 PLEKHO2Q8TD55 490 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 IRGQQ8WZA9 623 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 NMRK2Q9NPI5 230 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 PCDHGB1Q9Y5G3 927 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 PRR5-ARHGAP8B1AHC4 643 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 RBL1P28749 1068 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 NTSP30990 170 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ARHGAP8P85298 464 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 BRINP3Q76B58 766 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SYT12Q8IV01 421 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SEMA6AQ9H2E6 1030 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 PTPRJQ12913 1337 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 H0YAE9 185 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF24P17028 368 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SLC7A2P52569 658 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 PEX6Q13608 980 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 SMCO1Q147U7 214 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 NOMO1Q15155 1222 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 EEPD1Q7L9B9 569 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 RCN3Q96D15 328 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 A0A0J9YYE9 177 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 AIREO43918 545 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 ANGPTL1O95841 491 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 PRPS2P11908 318 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 CASP7P55210 303 aa10.22□□□□□ -0.77
PTCH1-204ENST00000375290 GPALPP1Q8IXQ4 340 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms