RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 CES1P23141 567 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 IGFALSP35858 605 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 CYP4F2P78329 520 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 CYP4F3Q08477 520 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 OCLNQ16625 522 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 C15orf40Q8WUR7 153 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 SEMA4DQ92854 862 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 EXD2Q9NVH0 621 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 COX4I1P13073 169 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 TOR1AIP2Q8NFQ8 470 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 FBXO30Q8TB52 745 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 ZNF224Q9NZL3 707 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 NDOR1Q9UHB4 597 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 NR2F1P10589 423 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 ASMTP46597 345 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 RPL21P46778 160 aaKnown RBP8.41□□□□□ -1.06
HSPG2-203ENST00000374695 MARCH10Q8NA82 808 aaPredicted RBP8.41□□□□□ -1.06
HSPG2-203ENST00000374695 HOPXQ9BPY8 73 aaPredicted RBP8.41□□□□□ -1.06
HSPG2-203ENST00000374695 SLC6A15Q9H2J7 730 aa8.41□□□□□ -1.06
HSPG2-203ENST00000374695 IFNA7P01567 189 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 AXLP30530 894 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 PSME3P61289 254 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 ELP6Q0PNE2 266 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 NEK7Q8TDX7 302 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 SPG21Q9NZD8 308 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 MAN2B2Q9Y2E5 1009 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 ZSCAN5CA6NGD5 496 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 ZNF432O94892 652 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 HLFQ16534 295 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 AGAP11Q8TF27 550 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 ACSF2Q96CM8 615 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 TMCO6Q96DC7 493 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 PHF12Q96QT6 1004 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 GULP1Q9UBP9 304 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 RIIAD1A6NNX1 92 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 NKRFO15226 690 aaKnown RBP eCLIP8.4□□□□□ -1.062e-13■■■□□ 15.5
HSPG2-203ENST00000374695 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 SMU1Q2TAY7 513 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 COLGALT2Q8IYK4 626 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 TELO2Q9Y4R8 837 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 CLUP10909 449 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 RPA3P35244 121 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 GRIA4P48058 902 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 PRKG2Q13237 762 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 USP41Q3LFD5 358 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 CHST15Q7LFX5 561 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 PTF1AQ7RTS3 328 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 XPNPEP3Q9NQH7 507 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 GTPBP1O00178 669 aaKnown RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 PLOD2O00469 737 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 SLC9A3R1O14745 358 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 SLC30A4O14863 429 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 SLC22A3O75751 556 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 FAM153BP0C7A2 387 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 TUBP50607 506 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 LIPEQ05469 1076 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 GRHL2Q6ISB3 625 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 CHRDL2Q6WN34 429 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 C11orf24Q96F05 449 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 TMEM94Q12767 1356 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 UPP2O95045 317 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 VAPBO95292 243 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 RASGEF1BQ0VAM2 473 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 BRSK2Q8IWQ3 736 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 MCOLN2Q8IZK6 566 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 TTC29Q8NA56 475 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 CCDC54Q8NEL0 328 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 FAM136AQ96C01 138 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 ACE2Q9BYF1 805 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 IFT80Q9P2H3 777 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 GPN3Q9UHW5 284 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 NUP50Q9UKX7 468 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 KANTRA0A1W2PQU2 76 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 PDCD5O14737 125 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 TRMUO75648 421 aaKnown RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 ZNF806P0C7X5 589 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 USF2Q15853 346 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-203ENST00000374695 KCNA10Q16322 511 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 OVOS1Q6IE37 1185 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 OGDHLQ9ULD0 1010 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 MYO7AQ13402 2215 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 TAS2R7Q9NYW3 318 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 PCYOX1Q9UHG3 505 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 CLEC4AQ9UMR7 237 aa8.4□□□□□ -1.06
HSPG2-203ENST00000374695 CENPBD1B2RD01 187 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 XKRYO14609 159 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 ZNF208O43345 1280 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 FMO4P31512 558 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 BUD31P41223 144 aaPredicted RBP8.4□□□□□ -1.07
HSPG2-203ENST00000374695 ZCCHC12Q6PEW1 402 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 CNPPD1Q9BV87 410 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 MRPL9Q9BYD2 267 aaKnown RBP8.4□□□□□ -1.07
HSPG2-203ENST00000374695 CIPCQ9C0C6 399 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 SEMA4AQ9H3S1 761 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 EXO5Q9H790 373 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 PKNOX1P55347 436 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 FCGRTP55899 365 aa8.4□□□□□ -1.07
HSPG2-203ENST00000374695 EPC2Q52LR7 807 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms