RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 GRK7Q8WTQ7 553 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 SLCO2A1Q92959 643 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 IFT43Q96FT9 208 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 RUNDC3BQ96NL0 473 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 LYSMD1Q96S90 227 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 C1QTNF2Q9BXJ5 285 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 GOLGA6AQ9NYA3 693 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 PCYOX1Q9UHG3 505 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 NEU2Q9Y3R4 380 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 CABIN1Q9Y6J0 2220 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 GVINP1Q7Z2Y8 2422 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 FSBPO95073 299 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 KRT14P02533 472 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 HLA-DPA1P20036 260 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 CD27P26842 260 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 VIPR1P32241 457 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ADRA1AP35348 466 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 HNF1BP35680 557 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 PTGER3P43115 390 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 TNNT3P45378 269 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 DHPSP49366 369 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 PPP2CBP62714 309 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 PPP2CAP67775 309 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 NHLH1Q02575 133 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 RALGDSQ12967 914 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 AGERQ15109 404 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 PCSK7Q16549 785 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 LRRC73Q5JTD7 316 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 SYCP2LQ5T4T6 812 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 LYSMD4Q5XG99 296 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 LAIR1Q6GTX8 287 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 USP45Q70EL2 814 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ZNF572Q7Z3I7 529 aaPredicted RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 RAVER1Q8IY67 606 aaKnown RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 DEFB119Q8N690 84 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 LPCAT1Q8NF37 534 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 IPMKQ8NFU5 416 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 CXorf40AQ8TE69 158 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ZNF592Q92610 1267 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 BIRC7Q96CA5 298 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 LRRC45Q96CN5 670 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 RMDN1Q96DB5 314 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 HSPA12BQ96MM6 686 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 SRPK1Q96SB4 655 aaKnown RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ORAI3Q9BRQ5 295 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 SLC17A9Q9BYT1 436 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 DDX47Q9H0S4 455 aaKnown RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ETNK1Q9HBU6 452 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ARNT2Q9HBZ2 717 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 FAM86C1Q9NVL1 165 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 B4GALT6Q9UBX8 382 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 GGT7Q9UJ14 662 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 SMG5Q9UPR3 1016 aaKnown RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ZFR2Q9UPR6 939 aaKnown RBP11.41□□□□□ -0.58
HSPG2-202ENST00000374676 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 ITM2BQ9Y287 266 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 PCDHGA5Q9Y5G8 931 aa11.41□□□□□ -0.58
HSPG2-202ENST00000374676 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 A0A1W2PPC4 97 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 PRR23AA6NEV1 266 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 IGLON5A6NGN9 336 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 CAPN8A6NHC0 703 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 MEI4A8MW99 385 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 F5H423 210 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 PSMD11O00231 422 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 MMP20O60882 483 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 URI1O94763 535 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 HEXIM1O94992 359 aaKnown RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 EPN2O95208 641 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 ECEL1O95672 775 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 AP2A1O95782 977 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 GAS8O95995 478 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 AGTP01019 485 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 LMNAP02545 664 aaKnown RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 PRKCGP05129 697 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 FGF1P05230 155 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 ATXN1LP0C7T5 689 aaKnown RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 ZSCAN5DPP0CG00 497 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 ZNF30P17039 623 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 CTPS1P17812 591 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 HOXD12P35452 270 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 LIG3P49916 1009 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 CREB5Q02930 508 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 SEMA5AQ13591 1074 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 SLC1A5Q15758 541 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 CDKN3Q16667 212 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 WHAMMP3Q1A5X7 153 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 ZNF284Q2VY69 593 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 SETMARQ53H47 684 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 SIRPB2Q5JXA9 342 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 PEAR1Q5VY43 1037 aaPredicted RBP11.4□□□□□ -0.58
HSPG2-202ENST00000374676 SEL1L3Q68CR1 1132 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 CRTC1Q6UUV9 634 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 LIPIQ6XZB0 460 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 KDELC2Q7Z4H8 507 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 PRUNE1Q86TP1 453 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 SPATA4Q8NEY3 305 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 LENG8Q96PV6 779 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms