RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 HCSTQ9UBK5 93 aa13.62□□□□□ -0.23
CLIC4-201ENST00000374379 LRCH1Q9Y2L9 728 aa13.62□□□□□ -0.23
CLIC4-201ENST00000374379 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 SYNCRIPO60506 623 aaKnown RBP13.61□□□□□ -0.23
CLIC4-201ENST00000374379 GABBR2O75899 941 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 MC4RP32245 332 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 ESRRGP62508 458 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 BCL2L1Q07817 233 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 PCLAFQ15004 111 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 PKDCCQ504Y2 493 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 TSTD2Q5T7W7 516 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 ARMC12Q5T9G4 340 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 HERC6Q8IVU3 1022 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 DNAJB14Q8TBM8 379 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 RPL10LQ96L21 214 aaKnown RBP13.61□□□□□ -0.23
CLIC4-201ENST00000374379 SLC2A13Q96QE2 648 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 CCDC90BQ9GZT6 254 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 CROTQ9UKG9 612 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 C1orf232A0A0U1RR37 186 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 SIX3O95343 332 aaPredicted RBP13.61□□□□□ -0.23
CLIC4-201ENST00000374379 HGFP14210 728 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 PSEN1P49768 467 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 SLC18A1P54219 525 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 GNA12Q03113 381 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 HSPA14Q0VDF9 509 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 ZC3HC1Q86WB0 502 aaKnown RBP13.61□□□□□ -0.23
CLIC4-201ENST00000374379 GPSM1Q86YR5 675 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 MYO1HQ8N1T3 1032 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 FCRL5Q96RD9 977 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 HAPLN3Q96S86 360 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 C17orf80Q9BSJ5 609 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 RIC8BQ9NVN3 520 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 EGFL7Q9UHF1 273 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 Q9Y3F1 56 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 INPP4BO15327 924 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 GOT2P00505 430 aaKnown RBP13.61□□□□□ -0.23
CLIC4-201ENST00000374379 GJA1P17302 382 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 GABRR2P28476 465 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 INPP5AQ14642 412 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 OTOP2Q7RTS6 562 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 ECSITQ9BQ95 431 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 WDR83Q9BRX9 315 aaKnown RBP13.61□□□□□ -0.23
CLIC4-201ENST00000374379 PNPLA8Q9NP80 782 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 PKD2L2Q9NZM6 624 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 PRKAG3Q9UGI9 489 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 TRAF6Q9Y4K3 522 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 PCDHB12Q9Y5F1 795 aa13.61□□□□□ -0.23
CLIC4-201ENST00000374379 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 TM7SF2O76062 418 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 SLC2A4P14672 509 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 TYMPP19971 482 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 IL2P60568 153 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 DPYSQ14117 519 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 SYTL3Q4VX76 610 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 STXBP5Q5T5C0 1151 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 ATXN7L2Q5T6C5 722 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 SIKE1Q9BRV8 207 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.6□□□□□ -0.235e-6■■□□□ 13.3
CLIC4-201ENST00000374379 ACTR8Q9H981 624 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 WDR6Q9NNW5 1121 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 ZNHIT2Q9UHR6 403 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 VPS9D1Q9Y2B5 631 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 FCF1Q9Y324 198 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 SYCE1LA8MT33 242 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 UBXN8O00124 270 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 TBX10O75333 385 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 PITRM1Q5JRX3 1037 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 MILR1Q7Z6M3 343 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 ARL14EPQ8N8R7 260 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 VPS45Q9NRW7 570 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 MOCS1Q9NZB8 636 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 A0A0D9SEW6 157 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 IPO13O94829 963 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 NELFEP18615 380 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 MAP4P27816 1152 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 EEF1DP29692 281 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 USP46P62068 366 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 AARS2Q5JTZ9 985 aaKnown RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 CLEC4FQ8N1N0 589 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 STAG3L4Q8TBR4 150 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 GPR21Q99679 349 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 EVLQ9UI08 416 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 MAGEA13PA6NCF6 341 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 ZBTB14O43829 449 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 ACSL4O60488 711 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 SLC11A1P49279 550 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 ZNF697Q5TEC3 545 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 IL27RAQ6UWB1 636 aa13.6□□□□□ -0.23
CLIC4-201ENST00000374379 NET1Q7Z628 596 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 TMCO2Q7Z6W1 182 aaPredicted RBP13.6□□□□□ -0.23
CLIC4-201ENST00000374379 AMIGO2Q86SJ2 522 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms