RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ASS1P00966 412 aaKnown RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 SBK3P0C264 359 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 RFC2P35250 354 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 TRIM71Q2Q1W2 868 aaKnown RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 LCN8Q6JVE9 175 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 CATSPER4Q7RTX7 472 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 LYSMD2Q8IV50 215 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 LEMD2Q8NC56 503 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 PSMA8Q8TAA3 256 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 CENPOQ9BU64 300 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 LHX5Q9H2C1 402 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 TLR9Q9NR96 1032 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 INTS10Q9NVR2 710 aaKnown RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 EGFL7Q9UHF1 273 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 SLCO3A1Q9UIG8 710 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 ADGRA2Q96PE1 1338 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 TTC24A2A3L6 582 aaPredicted RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 PRPSAP2O60256 369 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 MAN1A2O60476 641 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 UPK1BO75841 260 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 KRT6AP02538 564 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 KRT6BP04259 564 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 SLC26A2P50443 739 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 ZNF143P52747 638 aaPredicted RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 ADCK1Q86TW2 530 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 RHOXF1Q8NHV9 184 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 SPPL2BQ8TCT7 592 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 RASSF5Q8WWW0 418 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 ATL1Q8WXF7 558 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 SPC25Q9HBM1 224 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 ABCB10Q9NRK6 738 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 SYBUQ9NX95 663 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 NME4O00746 187 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 AXIN1O15169 862 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 UBDO15205 165 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 RAD51BO15315 384 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 DNAJB5O75953 348 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 TPPPO94811 219 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 POLBP06746 335 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 HTR1AP08908 422 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 EIF2DP41214 584 aaKnown RBP12.96□□□□□ -0.33
PRPF4-201ENST00000374198 GEN1Q17RS7 908 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 DPY19L1Q2PZI1 675 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 BSPRYQ5W0U4 402 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 UTS2BQ765I0 119 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 EXOC8Q8IYI6 725 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 NDNFQ8TB73 568 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 PHF10Q8WUB8 498 aaKnown RBP12.96□□□□□ -0.33
PRPF4-201ENST00000374198 SLC22A17Q8WUG5 538 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 FIG4Q92562 907 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 MFSD3Q96ES6 412 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 DACH2Q96NX9 599 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 AGO4Q9HCK5 861 aaKnown RBP12.96□□□□□ -0.33
PRPF4-201ENST00000374198 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 SNTG2Q9NY99 539 aa12.96□□□□□ -0.33
PRPF4-201ENST00000374198 SYCE1LA8MT33 242 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 AP3B1O00203 1094 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 GABARAPO95166 117 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 ABCG1P45844 678 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 GJA9P57773 515 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 NFIAQ12857 509 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 HSDL1Q3SXM5 330 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 CATSPEREQ5SY80 951 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 FKBP9P1Q75LS8 142 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 THAP5Q7Z6K1 395 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 LGI2Q8N0V4 545 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 POC5Q8NA72 575 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 HAPLN2Q9GZV7 340 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 CLPBQ9H078 707 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 HPS4Q9NQG7 708 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 CHRAC1Q9NRG0 131 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 ACTR3BQ9P1U1 418 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 RABL2AQ9UBK7 228 aaPredicted RBP12.96□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF639Q9UID6 485 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 MTF2Q9Y483 593 aaPredicted RBP12.96□□□□□ -0.34
PRPF4-201ENST00000374198 UGT2A1Q9Y4X1 527 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 PCDHGA8Q9Y5G5 932 aa12.96□□□□□ -0.34
PRPF4-201ENST00000374198 POLR2AP24928 1970 aaKnown RBP12.96□□□□□ -0.34
PRPF4-201ENST00000374198 DDHD2O94830 711 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 INMTO95050 263 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 GPIP06744 558 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 GFAPP14136 432 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ARSAP15289 507 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 GP2P55259 537 aaKnown RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 RACK1P63244 317 aaKnown RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 PRPSAP1Q14558 356 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ADPRMQ3LIE5 342 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 ZIK1Q3SY52 487 aaPredicted RBP12.95□□□□□ -0.34
PRPF4-201ENST00000374198 SPANXN3Q5MJ09 141 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 CDC42EP5Q6NZY7 148 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 TBPL2Q6SJ96 375 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 PRR23BQ6ZRT6 265 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 TMEM179Q6ZVK1 233 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 NAT16Q8N8M0 369 aa12.95□□□□□ -0.34
PRPF4-201ENST00000374198 HDAC2Q92769 488 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms