RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ZNF549Q6P9A3 640 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 AMIGO3Q86WK7 504 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 UNC5BQ8IZJ1 945 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 GIPC3Q8TF64 312 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 EMILIN2Q9BXX0 1053 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 ZNF358Q9NW07 568 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 TCAF1Q9Y4C2 921 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 MED26O95402 600 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 CYP2A7P20853 494 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 DGKAP23743 735 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 FSTL1Q12841 308 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 TBC1D19Q8N5T2 526 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 ADPRHL2Q9NX46 363 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 CNTNAP1P78357 1384 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 NPHS1O60500 1241 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 CBFA2T3O75081 653 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 CST1P01037 141 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 CHRNGP07510 517 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 RPL9P32969 192 aaKnown RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 IRF9Q00978 393 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 TIGD2Q4W5G0 525 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 FAM182AQ5T1J6 154 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 ARHGAP17Q68EM7 881 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 NECAB2Q7Z6G3 386 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 IGDCC3Q8IVU1 814 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 SLC44A2Q8IWA5 706 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 FAM156AQ8NDB6 213 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 LPPQ93052 612 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 LINC00854A0A1B0GVQ3 168 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 ARIH2O95376 493 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 FGF1P05230 155 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 GALNT3Q14435 633 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 RETSATQ6NUM9 610 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 BORCS5Q969J3 196 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 SNX27Q96L92 541 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 KLHL5Q96PQ7 755 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 MLPHQ9BV36 600 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 CCDC88AQ3V6T2 1871 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 PEX10O60683 326 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 DARSP14868 501 aaKnown RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 PRKCHP24723 683 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 CCNCP24863 283 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 SPATA22Q8NHS9 363 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 EZH1Q92800 747 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 MAGEL2Q9UJ55 1249 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 PTPRJQ12913 1337 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 ASNA1O43681 348 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 MRPS6P82932 125 aaKnown RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 SPATA19Q7Z5L4 167 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 MTFMTQ96DP5 389 aaKnown RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 HNRNPABQ99729 332 aaKnown RBP17.47■□□□□ 0.39
PTPRU-202ENST00000373779 VPS45Q9NRW7 570 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 STYXL1Q9Y6J8 313 aa17.47■□□□□ 0.39
PTPRU-202ENST00000373779 MYH3P11055 1940 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 FCGRTP55899 365 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 RPL38P63173 70 aaKnown RBP17.46■□□□□ 0.39
PTPRU-202ENST00000373779 ELAVL2Q12926 359 aaKnown RBP17.46■□□□□ 0.39
PTPRU-202ENST00000373779 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 NCBP2-AS2Q69YL0 99 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 CLEC6AQ6EIG7 209 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 BCO2Q9BYV7 579 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 REEP1Q9H902 201 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 ALDH2P05091 517 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 IVDP26440 423 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 RXRGP48443 463 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 UROC1Q96N76 676 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 ADAM2Q99965 735 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 AKR1A1P14550 325 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 ZNF460Q14592 562 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 GPR158Q5T848 1215 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 GCNT7Q6ZNI0 430 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 ZNF621Q6ZSS3 439 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 TWIST2Q8WVJ9 160 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 SEPT8Q92599 483 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 GALNT8Q9NY28 637 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 SH3BP4Q9P0V3 963 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 CRY1Q16526 586 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 UBAP2Q5T6F2 1119 aaKnown RBP17.46■□□□□ 0.39
PTPRU-202ENST00000373779 ZNF554Q86TJ5 538 aa17.46■□□□□ 0.39
PTPRU-202ENST00000373779 CPSF7Q8N684 471 aaKnown RBP17.46■□□□□ 0.39
PTPRU-202ENST00000373779 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 VPS26BQ4G0F5 336 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ARMC12Q5T9G4 340 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ESRP1Q6NXG1 681 aaKnown RBP17.45■□□□□ 0.38
PTPRU-202ENST00000373779 CRYGNQ8WXF5 182 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 SLC25A13Q9UJS0 675 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 DYRK1BQ9Y463 629 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 NAV1Q8NEY1 1877 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-202ENST00000373779 NUP98P52948 1817 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 LRIG2O94898 1065 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 EPN2O95208 641 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ABCB1P08183 1280 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ACAP2Q15057 778 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ARHGAP36Q6ZRI8 547 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 ZBTB46Q86UZ6 589 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 C11orf74Q86VG3 221 aa17.45■□□□□ 0.38
PTPRU-202ENST00000373779 CYP4Z1Q86W10 505 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms