RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 PAIP2Q9BPZ3 127 aaKnown RBP20.67■□□□□ 0.9
SYNC-201ENST00000373484 FAM126AQ9BYI3 521 aaPredicted RBP20.67■□□□□ 0.9
SYNC-201ENST00000373484 MMADHCQ9H3L0 296 aaPredicted RBP20.67■□□□□ 0.9
SYNC-201ENST00000373484 ETNK2Q9NVF9 386 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 HAO1Q9UJM8 370 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 ZNF148Q9UQR1 794 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 SHROOM3Q8TF72 1996 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 CACNA1HO95180 2353 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 CXorf51AA0A1B0GTR3 108 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 TCRBV21S2A2A0A5A6 115 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 H0Y858 1186 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 DNAJC6O75061 913 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 RPA3P35244 121 aaPredicted RBP20.67■□□□□ 0.9
SYNC-201ENST00000373484 NNMTP40261 264 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 ARF5P84085 180 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 DMWDQ09019 674 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 AFMIDQ63HM1 303 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 RASSF3Q86WH2 238 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 LZTR1Q8N653 840 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 NPWQ8N729 165 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 ATP11CQ8NB49 1132 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 FAF2Q96CS3 445 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 HMCESQ96FZ2 354 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 STOML1Q9UBI4 398 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 EBF1Q9UH73 591 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 SUN2Q9UH99 717 aa20.67■□□□□ 0.9
SYNC-201ENST00000373484 TTC34A8MYJ7 566 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 ATP9BO43861 1147 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 SYNCRIPO60506 623 aaKnown RBP20.66■□□□□ 0.9
SYNC-201ENST00000373484 CCDC22O60826 627 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 SPAG7O75391 227 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 MT-CO1P00395 513 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 PTPN5P54829 565 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 NRLP54845 237 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 CAMK2GQ13555 558 aaPredicted RBP20.66■□□□□ 0.9
SYNC-201ENST00000373484 HNRNPA1L2Q32P51 320 aaKnown RBP20.66■□□□□ 0.9
SYNC-201ENST00000373484 RETSATQ6NUM9 610 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 ADGRD1Q6QNK2 874 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 NLRP9Q7RTR0 991 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 OTOAQ7RTW8 1153 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 ARHGAP12Q8IWW6 846 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 CELF6Q96J87 481 aaKnown RBP20.66■□□□□ 0.9
SYNC-201ENST00000373484 ZFP69BQ9UJL9 534 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 DNPEPQ9ULA0 475 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 MFHAS1Q9Y4C4 1052 aa20.66■□□□□ 0.9
SYNC-201ENST00000373484 CCDC163A0A0D9SF12 145 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 LRRD1A4D1F6 860 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 C3orf70A6NLC5 250 aaPredicted RBP20.65■□□□□ 0.9
SYNC-201ENST00000373484 ZNF487B1APH4 448 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 KDELR3O43731 214 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 ALDH1A2O94788 518 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 SRCP12931 536 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 ABL2P42684 1182 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 PXNP49023 591 aaPredicted RBP20.65■□□□□ 0.9
SYNC-201ENST00000373484 GPS1Q13098 491 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 SERINC3Q13530 473 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 LLGL1Q15334 1064 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 SLC1A5Q15758 541 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 ANO7Q6IWH7 933 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 LINGO4Q6UY18 593 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 SPOCD1Q6ZMY3 1216 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 TTC13Q8NBP0 860 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 MDGA1Q8NFP4 955 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 FRS2Q8WU20 508 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 ERLEC1Q96DZ1 483 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 SLC39A8Q9C0K1 460 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 MTG2Q9H4K7 406 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 VPS37BQ9H9H4 285 aa20.65■□□□□ 0.9
SYNC-201ENST00000373484 NKX1-2Q9UD57 310 aaPredicted RBP20.65■□□□□ 0.9
SYNC-201ENST00000373484 FARP1Q9Y4F1 1045 aaPredicted RBP20.65■□□□□ 0.9
SYNC-201ENST00000373484 E7ESA3 106 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 POC1B-GALNT4F8VUJ3 575 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 FAM155BO75949 473 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 KRT1P04264 644 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 GABRG2P18507 467 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 KRT72Q14CN4 511 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 ZRSR2Q15696 482 aaKnown RBP20.64■□□□□ 0.9
SYNC-201ENST00000373484 TFDP3Q5H9I0 405 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 CLNKQ7Z7G1 428 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 PCDH19Q8TAB3 1148 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 IRF2BPLQ9H1B7 796 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 ACSS3Q9H6R3 686 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 SLCO1B3Q9NPD5 702 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 PRSS16Q9NQE7 514 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 ZSCAN32Q9NX65 697 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 GRID1Q9ULK0 1009 aa20.64■□□□□ 0.9
SYNC-201ENST00000373484 EDDM13A0A1B0GTR0 161 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 CD160O95971 181 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 SERPINB6P35237 376 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 FNTBP49356 437 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 SERPINH1P50454 418 aaKnown RBP20.64■□□□□ 0.89
SYNC-201ENST00000373484 COPAP53621 1224 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 ARL4CP56559 192 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 HIF1AQ16665 826 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 HEATR6Q6AI08 1181 aaKnown RBP20.64■□□□□ 0.89
SYNC-201ENST00000373484 WDR5BQ86VZ2 330 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 ZNF354CQ86Y25 554 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 PPIL6Q8IXY8 311 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 ZBTB44Q8NCP5 570 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 SLC35B2Q8TB61 432 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms