RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 GLP2RO95838 553 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 CORO1AP31146 461 aaKnown RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 CASP2P42575 452 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SEMA3AQ14563 771 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 TRIP4Q15650 581 aaPredicted RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 LHX8Q68G74 356 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 C8orf48Q96LL4 319 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 NSUN5Q96P11 429 aaKnown RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 KCNA7Q96RP8 456 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 DRC3Q9H069 523 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 TREX1Q9NSU2 369 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 DNAJC28Q9NX36 388 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 BTRCQ9Y297 605 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 UBXN8O00124 270 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 WFS1O76024 890 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 VNN2O95498 520 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 KLKB1P03952 638 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SERPINF2P08697 491 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 AP2B1P63010 937 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 PRKAA1Q13131 559 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SERINC3Q13530 473 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 EIF4EBP2Q13542 120 aaPredicted RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 GPNMBQ14956 572 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ATXN7L2Q5T6C5 722 aaPredicted RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SMYD5Q6GMV2 418 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 TMEM154Q6P9G4 183 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 UMODL1-AS1Q8N2C9 162 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 C2CD4AQ8NCU7 369 aaPredicted RBP11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ARRDC2Q8TBH0 407 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 YIPF3Q9GZM5 350 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 RNF38Q9H0F5 515 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 SPO11Q9Y5K1 396 aa11.8□□□□□ -0.52
PDE6C-201ENST00000371447 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 PLIN5Q00G26 463 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 CYLC2Q14093 348 aaPredicted RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 AGKQ53H12 422 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 ZRANB3Q5FWF4 1079 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 AGAP9Q5VTM2 703 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 RNF219Q5W0B1 726 aaPredicted RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 CILP2Q8IUL8 1156 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 LMNTD2Q8IXW0 634 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 ST13P5Q8NFI4 369 aaPredicted RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 SEPT8Q92599 483 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 FUBP3Q96I24 572 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 SLC24A3Q9HC58 644 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 PRDM5Q9NQX1 630 aaPredicted RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 TLR9Q9NR96 1032 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 A8MT66 165 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 CD3EAPO15446 510 aaKnown RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 COCHO43405 550 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 OR1I1O60431 355 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 RHOBTB1O94844 696 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 SEC24AO95486 1093 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 RHOCP08134 193 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 LTA4HP09960 611 aaKnown RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 RAG1P15918 1043 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 ZNF135P52742 658 aaPredicted RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 OXCT1P55809 520 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 C1QTNF8P60827 252 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 RALGDSQ12967 914 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 GPR17Q13304 367 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 TPGS1Q6ZTW0 290 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 ERLEC1Q96DZ1 483 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 GPR78Q96P69 363 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 SLC22A12Q96S37 553 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 CCDC68Q9H2F9 335 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 SEMA4BQ9NPR2 832 aaPredicted RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 TMEM248Q9NWD8 314 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 NSMCE4AQ9NXX6 385 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 POMPQ9Y244 141 aa11.79□□□□□ -0.52
PDE6C-201ENST00000371447 TDRD15B5MCY1 1934 aaKnown RBP11.79□□□□□ -0.52
PDE6C-201ENST00000371447 SUPT3HB4E1H0 165 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 H0Y626 953 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 K7ERQ8 282 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 SUPT3HO75486 399 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 IL1BP01584 269 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 LMNAP02545 664 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 CRABP2P29373 138 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 MAGEA12P43365 314 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ACTR3P61158 418 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 GNA12Q03113 381 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 STXBP5Q5T5C0 1151 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 KIAA0930Q6ICG6 404 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ANO7Q6IWH7 933 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 GLT6D1Q7Z4J2 308 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ARHGAP18Q8N392 663 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 TRPC4APQ8TEL6 797 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 IGSF5Q9NSI5 407 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 TIMM22Q9Y584 194 aa11.78□□□□□ -0.52
PDE6C-201ENST00000371447 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.78□□□□□ -0.52
PDE6C-201ENST00000371447 AP3B1O00203 1094 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms