RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 BANPQ8N9N5 519 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 GSTCDQ8NEC7 633 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 FBXO30Q8TB52 745 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SUSD6Q92537 303 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PACSIN3Q9UKS6 424 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 TBC1D30Q9Y2I9 924 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 GLTPD2A6NH11 291 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 MATN3O15232 486 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 FTH1P02794 183 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PKMP14618 531 aaKnown RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CERS6Q6ZMG9 384 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CCDC103Q8IW40 242 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CDK20Q8IZL9 346 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 MFSD3Q96ES6 412 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 LINGO1Q96FE5 620 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 MRPL48Q96GC5 212 aaKnown RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 TCF12Q99081 682 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 C1QTNF7Q9BXJ2 289 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 WDR55Q9H6Y2 383 aaPredicted RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CACNA2D2Q9NY47 1150 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 DTLQ9NZJ0 730 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PTGES3LE9PB15 166 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 MSI1O43347 362 aaKnown RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 DLGAP3O95886 979 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 HSMCR30P0CW71 290 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 TSPAN8P19075 237 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 MC4RP32245 332 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 OR1D2P34982 312 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 ST13P50502 369 aaKnown RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC7A2P52569 658 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC18A1P54219 525 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SEMA5AQ13591 1074 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PLCL1Q15111 1095 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 HECTD2Q5U5R9 776 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 B3GNT6Q6ZMB0 384 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 OTOP3Q7RTS5 596 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 GPR180Q86V85 440 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SFRP1Q8N474 314 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SPATA6LQ8N4H0 392 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 TSPAN14Q8NG11 270 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 STYXQ8WUJ0 223 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SNRNP27Q8WVK2 155 aaKnown RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PCED1BQ96HM7 432 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PAIP1Q9H074 479 aaKnown RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 RIBC2Q9H4K1 309 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 HPS4Q9NQG7 708 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 KLHL3Q9UH77 587 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 E9PAM4 449 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 DNM1LO00429 736 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 GALNT3Q14435 633 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 TAF5Q15542 800 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CNTD1Q8N815 330 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNF614Q8N883 585 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 ADCY4Q8NFM4 1077 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 PROX1Q92786 737 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 GRIP2Q9C0E4 1043 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 BPIFA1Q9NP55 256 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 BTRCQ9Y297 605 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNF510Q9Y2H8 683 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 ANKDD1BA6NHY2 528 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ADH1AP07327 375 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 FAM163BP0C2L3 166 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 SMPD1P17405 629 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 MPSTP25325 297 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 GRK4P32298 578 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 PBX3P40426 434 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 RPL38P63173 70 aaKnown RBP11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 DUSP4Q13115 394 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ARMCX4Q5H9R4 360 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ABRAXAS1Q6UWZ7 409 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNF438Q7Z4V0 828 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 KRT73Q86Y46 540 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 MIEF2Q96C03 454 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TEKT5Q96M29 485 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 BBS4Q96RK4 519 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 DCUN1D5Q9BTE7 237 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 DDX18Q9NVP1 670 aaKnown RBP11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TCAF1Q9Y4C2 921 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TULP2O00295 520 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 SIN3BO75182 1162 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 MED26O95402 600 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 GRM3Q14832 879 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ARL13AQ5H913 290 aaPredicted RBP11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 DCAF12L1Q5VU92 463 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ZYG11AQ6WRX3 759 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 ATAD1Q8NBU5 361 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 NDRG1Q92597 394 aaKnown RBP11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 NTAN1Q96AB6 310 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 C8orf4Q9NR00 106 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 RHBDL2Q9NX52 303 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 RBPJLQ9UBG7 517 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 CHKBQ9Y259 395 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 KCNE2Q9Y6J6 123 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 PNMA8CA0A1B0GUJ8 204 aa11.88□□□□□ -0.51
DEPDC1-201ENST00000370966 TRIM24O15164 1050 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms