RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 KLQ9UEF7 1012 aa11.12□□□□□ -0.63
EXOSC1-204ENST00000370902 PISDQ9UG56 409 aa11.12□□□□□ -0.63
EXOSC1-204ENST00000370902 RNF215Q9Y6U7 377 aa11.12□□□□□ -0.63
EXOSC1-204ENST00000370902 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
EXOSC1-204ENST00000370902 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 J3KR12 359 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 SUV39H1O43463 412 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 FUCA1P04066 466 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 ITGB2P05107 769 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 PCCBP05166 539 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 FAM87AP0C7U9 286 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 CSRP3P50461 194 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 BLKP51451 505 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 SUOXP51687 545 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 YBEYP58557 167 aaPredicted RBP11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 B4GALNT1Q00973 533 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 KCNC4Q03721 635 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 ELP6Q0PNE2 266 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 CLCA4Q14CN2 919 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 CYP4V2Q6ZWL3 525 aaPredicted RBP11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 PRICKLE2Q7Z3G6 844 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 ZNF438Q7Z4V0 828 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 ZFAND4Q86XD8 727 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 DNAAF5Q86Y56 855 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 NRROSQ86YC3 692 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 CAMK1DQ8IU85 385 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 ARHGAP12Q8IWW6 846 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 MSANTD4Q8NCY6 345 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 C3orf20Q8ND61 904 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 LGR4Q9BXB1 951 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 C1QTNF7Q9BXJ2 289 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 SEMA6CQ9H3T2 930 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 SUV39H2Q9H5I1 410 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 FZD10Q9ULW2 581 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 HPCAL4Q9UM19 191 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 SIK3Q9Y2K2 1263 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 ATP8A1Q9Y2Q0 1164 aa11.11□□□□□ -0.63
EXOSC1-204ENST00000370902 TMEM110-MUSTN1A8MSY1 372 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 AGRPO00253 132 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 RRP9O43818 475 aaKnown RBP11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 PRAMEF11O60813 436 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 PNLIPP16233 465 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 GLB1P16278 677 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 GPD1P21695 349 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 ERCC5P28715 1186 aaPredicted RBP11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 EPHB2P29323 1055 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 TRIM23P36406 574 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 UBE2HP62256 183 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 RPL7AP62424 266 aaKnown RBP11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 CYP4F2P78329 520 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 NR1D2Q14995 579 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 CA9Q16790 459 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 CLEC16AQ2KHT3 1053 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 PARP15Q460N3 678 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 C14orf28Q4W4Y0 310 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 TCP11X2Q5H9J9 407 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 CDKAL1Q5VV42 579 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 AFMIDQ63HM1 303 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 LIPIQ6XZB0 460 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 ZNF574Q6ZN55 896 aaPredicted RBP11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 RD3Q7Z3Z2 195 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 SLFN11Q7Z7L1 901 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 GKN2Q86XP6 184 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 ARFGAP1Q8N6T3 406 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 NPWQ8N729 165 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 TMEM74Q96NL1 305 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 TMEM168Q9H0V1 697 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 CLSTN2Q9H4D0 955 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 TAB2Q9NYJ8 693 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 IL17BQ9UHF5 180 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 DAAM1Q9Y4D1 1078 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 USP9YO00507 2555 aaPredicted RBP11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 TEX15Q9BXT5 2789 aa11.1□□□□□ -0.63
EXOSC1-204ENST00000370902 B4DGG1 531 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 B4GAT1O43505 415 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 RECQL5O94762 991 aaPredicted RBP11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 KRT3P12035 628 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 CCL4P13236 92 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 SOX5P35711 763 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 ZNF143P52747 638 aaPredicted RBP11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 MAZP56270 477 aaKnown RBP11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 TBR1Q16650 682 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 SPECC1LQ69YQ0 1117 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 BRAT1Q6PJG6 821 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 ARHGAP36Q6ZRI8 547 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 JAMLQ86YT9 394 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 FAM114A1Q8IWE2 563 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 TP53INP2Q8IXH6 220 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 Q8N9G6 341 aaPredicted RBP11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 OR6C4Q8NGE1 309 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 OR56A4Q8NGH8 313 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 USP7Q93009 1102 aa11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 ZNF641Q96N77 438 aaPredicted RBP11.09□□□□□ -0.63
EXOSC1-204ENST00000370902 TUBGCP5Q96RT8 1024 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms