RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CASKO14936 926 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 CCNB2O95067 398 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 TSPAN8P19075 237 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 RPL5P46777 297 aaKnown RBP12.51□□□□□ -0.41
HCFC1-202ENST00000369984 RPL38P63173 70 aaKnown RBP12.51□□□□□ -0.41
HCFC1-202ENST00000369984 TPGS1Q6ZTW0 290 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 OAFQ86UD1 273 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 ALYREFQ86V81 257 aaKnown RBP12.51□□□□□ -0.41
HCFC1-202ENST00000369984 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-202ENST00000369984 SLC28A2O43868 658 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 NOS1APO75052 506 aaPredicted RBP12.51□□□□□ -0.41
HCFC1-202ENST00000369984 ENTPD5O75356 428 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 SERPINA3P01011 423 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 ITGAVP06756 1048 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 CCNB1P14635 433 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 RAB27AP51159 221 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 NEPROQ6NW34 567 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 SLCO6A1Q86UG4 719 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 EFCAB3Q8N7B9 438 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 OR52E6Q96RD3 313 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 PANX1Q96RD7 426 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 PMF1-BGLAPU3KQ54 211 aa12.51□□□□□ -0.41
HCFC1-202ENST00000369984 ULK1O75385 1050 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 GCNT1Q02742 428 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 TRIM40Q6P9F5 258 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 CSGALNACT1Q8TDX6 532 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 GJD4Q96KN9 370 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 COPS4Q9BT78 406 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 MAT2BQ9NZL9 334 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ALOX5P09917 674 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ADAM17P78536 824 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 CNSTQ6PJW8 725 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 CRELD2Q6UXH1 353 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 GPRIN3Q6ZVF9 776 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ARCQ7LC44 396 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 DEFB106AQ8N104 65 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 TTLL2Q9BWV7 592 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 STARD7Q9NQZ5 370 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■□□□ 12.2
HCFC1-202ENST00000369984 PRKAB1Q9Y478 270 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 GSAPA4D1B5 854 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 FADS2O95864 444 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 HGFP14210 728 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 THOP1P52888 689 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 NAA20P61599 178 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 OLR1P78380 273 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ELAVL2Q12926 359 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 DLG1Q12959 904 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 PSMD5Q16401 504 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ZBTB46Q86UZ6 589 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 OR8H3Q8N146 312 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 FAM98AQ8NCA5 519 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 DENND6BQ8NEG7 585 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ATL1Q8WXF7 558 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 OR12D3Q9UGF7 316 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 EGFL7Q9UHF1 273 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ADAM28Q9UKQ2 775 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 BTRCQ9Y297 605 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 TRIM38O00635 465 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 GJB6O95452 261 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 CCDC88AQ3V6T2 1871 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 YTHDF3Q7Z739 585 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 CHST7Q9NS84 486 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 PLOD2O00469 737 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 SERPINA1P01009 418 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 MTHFRP42898 656 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 IRF8Q02556 426 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 POM121L1PQ3SYA9 428 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 UNC5AQ6ZN44 842 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 C12orf56Q8IXR9 622 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 GIT1Q9Y2X7 761 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 IRGMA1A4Y4 181 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 PPP2R2BQ00005 443 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 LSM14AQ8ND56 463 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 CCDC54Q8NEL0 328 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 RFXANKO14593 260 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 SERPINB7O75635 380 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ZBTB11O95625 1053 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 TGFB3P10600 412 aa12.5□□□□□ -0.41
HCFC1-202ENST00000369984 ZNF135P52742 658 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 RNASE12Q5GAN4 147 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 TRNT1Q96Q11 434 aaKnown RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
HCFC1-202ENST00000369984 TRIM64A6NGJ6 449 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 ARHGEF33A8MVX0 844 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 SNRPD1P62314 119 aaKnown RBP12.49□□□□□ -0.41
HCFC1-202ENST00000369984 MYBPC3Q14896 1274 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 HKDC1Q2TB90 917 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 RAB11FIP2Q7L804 512 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 TMEM168Q9H0V1 697 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
HCFC1-202ENST00000369984 SIGLEC16A6NMB1 481 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms