RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 RFTN1Q14699 578 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 ARHGAP40Q5TG30 622 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 KCTD16Q68DU8 428 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 RFX8Q6ZV50 586 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 CYP4V2Q6ZWL3 525 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 PSTKQ8IV42 348 aaKnown RBP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 ARL14Q8N4G2 192 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 PLA2G15Q8NCC3 412 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 OR6C4Q8NGE1 309 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 FNIP1Q8TF40 1166 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 CCDC74AQ96AQ1 378 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 CCDC97Q96F63 343 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 LIN37Q96GY3 246 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 KCTD15Q96SI1 283 aaPredicted RBP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 RBM15Q96T37 977 aaKnown RBP eCLIP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 SIRPGQ9P1W8 387 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 KLQ9UEF7 1012 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 PCSK1NQ9UHG2 260 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 GPR34Q9UPC5 381 aa16.11■□□□□ 0.17
CKS1B-202ENST00000368436 HELZ2Q9BYK8 2649 aaKnown RBP16.11■□□□□ 0.17
CKS1B-202ENST00000368436 TEX33O43247 280 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 DAPK3O43293 454 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
CKS1B-202ENST00000368436 RNF8O76064 485 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 RECQL5O94762 991 aaPredicted RBP16.1■□□□□ 0.17
CKS1B-202ENST00000368436 TNFSF15O95150 251 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 HOXC4P09017 264 aaPredicted RBP16.1■□□□□ 0.17
CKS1B-202ENST00000368436 GM2AP17900 193 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 MIPP30301 263 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 ZNF135P52742 658 aaPredicted RBP16.1■□□□□ 0.17
CKS1B-202ENST00000368436 KIAA1024LP59773 190 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 POLR2LP62875 67 aaKnown RBP16.1■□□□□ 0.17
CKS1B-202ENST00000368436 CFHR1Q03591 330 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 BCL2L1Q07817 233 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 OGFOD3Q6PK18 319 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 LIPIQ6XZB0 460 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 ARHGAP36Q6ZRI8 547 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 NPWQ8N729 165 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 GPR156Q8NFN8 814 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 FUBP1Q96AE4 644 aaKnown RBP16.1■□□□□ 0.17
CKS1B-202ENST00000368436 PDXPQ96GD0 296 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 NSMCE3Q96MG7 304 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 GBP4Q96PP9 640 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 CINPQ9BW66 212 aaPredicted RBP16.1■□□□□ 0.17
CKS1B-202ENST00000368436 TRIM7Q9C029 511 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 SP110Q9HB58 689 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 KALRNO60229 2985 aa16.1■□□□□ 0.17
CKS1B-202ENST00000368436 UNC13CQ8NB66 2214 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 A0A1W2PQM1 296 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 TMEM202A6NGA9 273 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 LRRC53A6NM62 1247 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 TMX2-CTNND1H3BSU7 103 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 TRAFD1O14545 582 aaPredicted RBP16.09■□□□□ 0.17
CKS1B-202ENST00000368436 TNFRSF10CO14798 259 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 ITGA2BP08514 1039 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 GZMAP12544 262 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 TRIM23P36406 574 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 CCL7P80098 99 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 EIF3IQ13347 325 aaKnown RBP16.09■□□□□ 0.17
CKS1B-202ENST00000368436 TCEA2Q15560 299 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 DPPA4Q7L190 304 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 B3GNT8Q7Z7M8 397 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 OR56A4Q8NGH8 313 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 OR1E3Q8WZA6 343 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 SPOCK2Q92563 424 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 TTC9Q92623 222 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 PSKH2Q96QS6 385 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 GFM1Q96RP9 751 aaKnown RBP16.09■□□□□ 0.17
CKS1B-202ENST00000368436 HAUS4Q9H6D7 363 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 SYNDIG1Q9H7V2 258 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
CKS1B-202ENST00000368436 AIPL1Q9NZN9 384 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 CWC15Q9P013 229 aaKnown RBP16.09■□□□□ 0.17
CKS1B-202ENST00000368436 APPL1Q9UKG1 709 aa16.09■□□□□ 0.17
CKS1B-202ENST00000368436 CAPN8A6NHC0 703 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 D6RAR5 112 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 K7ENP7 123 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 DFFAO00273 331 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 CACNB4O00305 520 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-202ENST00000368436 PRPSAP2O60256 369 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 LRCH4O75427 683 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 FTLP02792 175 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-202ENST00000368436 ELFN1P0C7U0 828 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 KELP23276 732 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 CCKBRP32239 447 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 PRKCIP41743 596 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 AP1S1P61966 158 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 CLN3Q13286 438 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 DPYSQ14117 519 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 TAF1BQ53T94 588 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-202ENST00000368436 PPP6R3Q5H9R7 873 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-202ENST00000368436 INO80CQ6PI98 192 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-202ENST00000368436 ZNF571Q7Z3V5 609 aaPredicted RBP16.08■□□□□ 0.16
CKS1B-202ENST00000368436 LZTR1Q8N653 840 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 LRRN3Q9H3W5 708 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 FGF22Q9HCT0 170 aa16.08■□□□□ 0.16
CKS1B-202ENST00000368436 CNOT8Q9UFF9 292 aaKnown RBP16.08■□□□□ 0.16
CKS1B-202ENST00000368436 PCDHGA7Q9Y5G6 932 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms