RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 LIG3P49916 1009 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 WASHC5Q12768 1159 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 ZNF211Q13398 564 aaPredicted RBP22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 TEX44Q53QW1 395 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 ARMC12Q5T9G4 340 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 LIPIQ6XZB0 460 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 DBX2Q6ZNG2 339 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 DGLUCYQ7Z3D6 616 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 ZC3H18Q86VM9 953 aaKnown RBP22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 SLC22A18ASQ8N1D0 253 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 TP53I13Q8NBR0 393 aaPredicted RBP22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 DENND6BQ8NEG7 585 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 ELF4Q99607 663 aaPredicted RBP22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 TDRD1Q9BXT4 1180 aaKnown RBP22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 GDF3Q9NR23 364 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 SEPT10Q9P0V9 454 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 B4GALT6Q9UBX8 382 aa22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 ARID1BQ8NFD5 2236 aaPredicted RBP22.55■■□□□ 1.2
ECHDC1-203ENST00000368291 A0A1B0GTQ1 180 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 CFAP69A5D8W1 941 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 PTPN3P26045 913 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 IGFALSP35858 605 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 SKOR1P84550 965 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 AGERQ15109 404 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 NOMO1Q15155 1222 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 KYAT3Q6YP21 454 aaKnown RBP22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 UBL4BQ8N7F7 174 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 PAF1Q8N7H5 531 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 AGAP3Q96P47 875 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 QKIQ96PU8 341 aaKnown RBP eCLIP22.54■■□□□ 1.23e-7■■■■□ 24.7
ECHDC1-203ENST00000368291 SMIM14Q96QK8 99 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 ERVMER34-1Q9H9K5 563 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 LZTFL1Q9NQ48 299 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 MBNL1Q9NR56 388 aaKnown RBP22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 HAUS2Q9NVX0 235 aa22.54■■□□□ 1.2
ECHDC1-203ENST00000368291 A6NNZ2 444 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 A8MX80 341 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 MAGEC1O60732 1142 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 CSRP1P21291 193 aaKnown RBP22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 CD86P42081 329 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 Q6ZSR6 202 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 CBARPQ8N350 705 aaPredicted RBP22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 FAM174AQ8TBP5 190 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 ACTL9Q8TC94 416 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 MCCC1Q96RQ3 725 aaPredicted RBP22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 CHKBQ9Y259 395 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 PPP2R2CQ9Y2T4 447 aa22.53■■□□□ 1.2
ECHDC1-203ENST00000368291 NPIPB15A6NHN6 443 aaPredicted RBP22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 GIPC1O14908 333 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 DFNA5O60443 496 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 KCNK5O95279 499 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 CD68P34810 354 aaPredicted RBP22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 PFN3P60673 137 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 IL9RQ01113 521 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 OTUD4Q01804 1114 aaKnown RBP22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 XRCC4Q13426 336 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 WSCD2Q2TBF2 565 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 TPRG1LQ5T0D9 272 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 DEFB124Q8NES8 71 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 TADA1Q96BN2 335 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 SCRN2Q96FV2 425 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 IMP4Q96G21 291 aaKnown RBP22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 PDLIM2Q96JY6 352 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 TEKT5Q96M29 485 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 CAAP1Q9H8G2 361 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 C10orf88Q9H8K7 445 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 PCDHGB2Q9Y5G2 931 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 CACNA1AO00555 2505 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 LRP4O75096 1905 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 SPTBN2O15020 2390 aa22.52■■□□□ 1.2
ECHDC1-203ENST00000368291 HACD1B0YJ81 288 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 FPGTO14772 594 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 SH3BP5O60239 455 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 PCDHGA12O60330 932 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 ALPIP09923 528 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 CTPS1P17812 591 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 LHCGRP22888 699 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 VIPR1P32241 457 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 CETN2P41208 172 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 RXRGP48443 463 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 CCT8P50990 548 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 IRF4Q15306 451 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 CNGA3Q16281 694 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 PTAR1Q7Z6K3 402 aaPredicted RBP22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 CAMK1GQ96NX5 476 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 RBM15Q96T37 977 aaKnown RBP eCLIP22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 FAM118BQ9BPY3 351 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 SLC25A51Q9H1U9 297 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 KCNF1Q9H3M0 494 aa22.51■■□□□ 1.19
ECHDC1-203ENST00000368291 A0A0J9YYE9 177 aa22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 A0A0U1RQS6 177 aa22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 NRDCO43847 1150 aa22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 LZTS3O60299 673 aaPredicted RBP22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 RECQL5O94762 991 aaPredicted RBP22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 HEXIM1O94992 359 aaKnown RBP22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 TJP3O95049 919 aa22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 TRBC1P01850 177 aa22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 ELFN1P0C7U0 828 aa22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 KLF1Q13351 362 aaPredicted RBP22.5■■□□□ 1.19
ECHDC1-203ENST00000368291 PPM1JQ5JR12 505 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms