RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ARRB2P32121 409 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 NPY2RP49146 381 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 RPL14P50914 215 aaKnown RBP11.61□□□□□ -0.55
USF1-201ENST00000368019 STARD6P59095 220 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 NTHL1P78549 312 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 HPCAP84074 193 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 NSUN2Q08J23 767 aaKnown RBP eCLIP11.61□□□□□ -0.55
USF1-201ENST00000368019 ELAVL2Q12926 359 aaKnown RBP11.61□□□□□ -0.55
USF1-201ENST00000368019 TRAP1Q12931 704 aaKnown RBP11.61□□□□□ -0.55
USF1-201ENST00000368019 RAB33AQ14088 237 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 MAPRE2Q15555 327 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 NADK2Q4G0N4 442 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 LIPMQ5VYY2 423 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 DCLRE1AQ6PJP8 1040 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 DHRS4L2Q6PKH6 230 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 PARM1Q6UWI2 310 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 PDZD4Q76G19 769 aaPredicted RBP11.61□□□□□ -0.55
USF1-201ENST00000368019 KLHDC8BQ8IXV7 354 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 DSELQ8IZU8 1212 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 PHTF2Q8N3S3 785 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 DCLK2Q8N568 766 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 LRRC52Q8N7C0 313 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 ZNF781Q8N8C0 355 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.61□□□□□ -0.55
USF1-201ENST00000368019 KBTBD7Q8WVZ9 684 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 BIRC8Q96P09 236 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 LENG8Q96PV6 779 aaPredicted RBP11.61□□□□□ -0.55
USF1-201ENST00000368019 GCNAQ96QF7 691 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 TSPAN18Q96SJ8 248 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 OSBPL11Q9BXB4 747 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 DHX35Q9H5Z1 703 aaKnown RBP11.61□□□□□ -0.55
USF1-201ENST00000368019 EFCAB1Q9HAE3 211 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 PLEKHA5Q9HAU0 1116 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 CYP4F11Q9HBI6 524 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 CASS4Q9NQ75 786 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 C8orf4Q9NR00 106 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 OXSMQ9NWU1 459 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 SARDHQ9UL12 918 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 CDH7Q9ULB5 785 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 SIT1Q9Y3P8 196 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 COL4A3Q01955 1670 aa11.61□□□□□ -0.55
USF1-201ENST00000368019 TSC2P49815 1807 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 F5P12259 2224 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 A0A096LPK6 155 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 CAPN8A6NHC0 703 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 NPHS1O60500 1241 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 DAB1O75553 588 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 AP2A1O95782 977 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 C8AP07357 584 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 DCNP07585 359 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 IMPDH2P12268 514 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 ZNF23P17027 643 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 ALDH3B2P48448 385 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 NUDT2P50583 147 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 BCAT1P54687 386 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 MYBPC1Q00872 1141 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 BST2Q10589 180 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 ANO4Q32M45 955 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 SLC10A6Q3KNW5 377 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 SLC9B1Q4ZJI4 515 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 RAB6CQ53S08 254 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 TCHHL1Q5QJ38 904 aaPredicted RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 SEL1L3Q68CR1 1132 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 PMF1Q6P1K2 205 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 CASC4Q6P4E1 433 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 KLHDC10Q6PID8 442 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 RSPO2Q6UXX9 243 aaPredicted RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 ATG14Q6ZNE5 492 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 RBM44Q6ZP01 1051 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 RTL10Q7L3V2 364 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 BNIPLQ7Z465 357 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 CROCCP3Q8IVE0 287 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 CCDC117Q8IWD4 279 aaPredicted RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 CHERPQ8IWX8 916 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 NUP93Q8N1F7 819 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 ST13P5Q8NFI4 369 aaPredicted RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 FGF13Q92913 245 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 CCDC124Q96CT7 223 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 PIWIL1Q96J94 861 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 MAELQ96JY0 434 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 FAR2Q96K12 515 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 TSNARE1Q96NA8 513 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 PPP1R10Q96QC0 940 aaKnown RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 VAT1Q99536 393 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 GATA5Q9BWX5 397 aaPredicted RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 RAB6CQ9H0N0 254 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 NMRAL1Q9HBL8 299 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 LRRC4Q9HBW1 653 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 ZBTB26Q9HCK0 441 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 TBCCD1Q9NVR7 557 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 SYBUQ9NX95 663 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 DPP3Q9NY33 737 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 TUBA8Q9NY65 449 aaPredicted RBP11.6□□□□□ -0.55
USF1-201ENST00000368019 BFARQ9NZS9 450 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 MTRRQ9UBK8 725 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 FZD10Q9ULW2 581 aa11.6□□□□□ -0.55
USF1-201ENST00000368019 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms