RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TEFMQ96QE5 360 aaKnown RBP15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 CRISPLD1Q9H336 500 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.76■□□□□ 0.112e-6■■□□□ 11.6
NUCKS1-201ENST00000367142 TLR5O60602 858 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 GLI1P08151 1106 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 CBX5P45973 191 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 ATAT1Q5SQI0 421 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 C2CD2Q9Y426 696 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 ATP6V1G2O95670 118 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 SSR2P43308 183 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 CDH24Q86UP0 819 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 TMC8Q8IU68 726 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 OR4L1Q8NH43 312 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 ETNPPLQ8TBG4 499 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 AIF1LQ9BQI0 150 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 DEC1Q9P2X7 70 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 IRGMA1A4Y4 181 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 LIN7AO14910 233 aaPredicted RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 IDSP22304 550 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 CXCR3P49682 368 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 RAB2AP61019 212 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 CDK18Q07002 472 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 FAM151BQ6UXP7 276 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 UNC5AQ6ZN44 842 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 GALNT7Q86SF2 657 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 RDH11Q8TC12 318 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 MAGEE2Q8TD90 523 aaPredicted RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 PANX1Q96RD7 426 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 NDNQ99608 321 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 ACO2Q99798 780 aaKnown RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 SNRNP25Q9BV90 132 aaKnown RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 DNAJC18Q9H819 358 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 IL17RBQ9NRM6 502 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 UNC13BO14795 1591 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 SSNA1O43805 119 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 CHRNGP07510 517 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 TMC3Q7Z5M5 1100 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 TSPAN14Q8NG11 270 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 CCDC177Q9NQR7 707 aaPredicted RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 MRPS7Q9Y2R9 242 aaKnown RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 GPC6Q9Y625 555 aaPredicted RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 ATP13A5Q4VNC0 1218 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 C16orf46Q6P387 395 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 SAR1AQ9NR31 198 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 TRPS1Q9UHF7 1281 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 AIF1P55008 147 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 TAF5Q15542 800 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 HIPK1Q86Z02 1210 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 LINGO1Q96FE5 620 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 DCUN1D5Q9BTE7 237 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 PAIP1Q9H074 479 aaKnown RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 HES2Q9Y543 173 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 ZNF37AP17032 561 aaPredicted RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 PKNOX1P55347 436 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 MAMLD1Q13495 774 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 DGCR6Q14129 220 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 SDHAF4Q5VUM1 108 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 TCAIMQ8N3R3 496 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 CDYL2Q8N8U2 506 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 ALPPL2P10696 532 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 BRMS1LQ5PSV4 323 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 UBE2R2Q712K3 238 aaPredicted RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 BEND5Q7L4P6 421 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 PHC3Q8NDX5 983 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 SMG7Q92540 1137 aaKnown RBP15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 AP2M1Q96CW1 435 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 MPP4Q96JB8 637 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 ZNF670Q9BS34 389 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 CKLFQ9UBR5 152 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 IRAK3Q9Y616 596 aa15.75■□□□□ 0.11
NUCKS1-201ENST00000367142 OR5F1O95221 314 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 MANFP55145 182 aaKnown RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 SPDYCQ5MJ68 293 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 LRRC38Q5VT99 294 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 HPS6Q86YV9 775 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 DAW1Q8N136 415 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 C1QTNF1Q9BXJ1 281 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 LACRTQ9GZZ8 138 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 ZDHHC4Q9NPG8 344 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 UBAP1Q9NZ09 502 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 ABCG1P45844 678 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 PPIGQ13427 754 aaKnown RBP eCLIP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 SMU1Q2TAY7 513 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 PJA1Q8NG27 643 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 AP3S1Q92572 193 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 MTRRQ9UBK8 725 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 BTRCQ9Y297 605 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 EML1O00423 815 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 XKRYO14609 159 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 IRF6O14896 467 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 CCL16O15467 120 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 PROCP04070 461 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 TSHRP16473 764 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 GRIA4P48058 902 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 ADCY4Q8NFM4 1077 aa15.74■□□□□ 0.11
NUCKS1-201ENST00000367142 MCMBPQ9BTE3 642 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms