RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 CAAP1Q9H8G2 361 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 SP110Q9HB58 689 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 TP53BP1Q12888 1972 aaPredicted RBP17.06■□□□□ 0.32
PRKN-202ENST00000366892 ARID1BQ8NFD5 2236 aaPredicted RBP17.06■□□□□ 0.32
PRKN-202ENST00000366892 FPGTO14772 594 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 MMP20O60882 483 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 NSUN2Q08J23 767 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKN-202ENST00000366892 RFTN1Q14699 578 aaPredicted RBP17.06■□□□□ 0.32
PRKN-202ENST00000366892 PPP2R5EQ16537 467 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 UGP2Q16851 508 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 PTAR1Q7Z6K3 402 aaPredicted RBP17.06■□□□□ 0.32
PRKN-202ENST00000366892 SRLQ86TD4 932 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 CENPTQ96BT3 561 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 ZNF641Q96N77 438 aaPredicted RBP17.06■□□□□ 0.32
PRKN-202ENST00000366892 PCDH18Q9HCL0 1135 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 CELSR3Q9NYQ7 3312 aa17.06■□□□□ 0.32
PRKN-202ENST00000366892 TSPAN11A1L157 253 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 PDE2AO00408 941 aaPredicted RBP17.05■□□□□ 0.32
PRKN-202ENST00000366892 MUSKO15146 869 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 TM7SF2O76062 418 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 DGKAP23743 735 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 IL4RP24394 825 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 NOP2P46087 812 aaKnown RBP17.05■□□□□ 0.32
PRKN-202ENST00000366892 RABIFP47224 123 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 SUOXP51687 545 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 SLC10A7Q0GE19 358 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 ZNF542PQ5EBM4 170 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 EIF1ADQ8N9N8 165 aaKnown RBP17.05■□□□□ 0.32
PRKN-202ENST00000366892 DENND6BQ8NEG7 585 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 ZNF564Q8TBZ8 553 aaPredicted RBP17.05■□□□□ 0.32
PRKN-202ENST00000366892 ACTRT1Q8TDG2 376 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 CXorf40AQ8TE69 158 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 COG1Q8WTW3 980 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 IFT43Q96FT9 208 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 TUBGCP5Q96RT8 1024 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 CINPQ9BW66 212 aaPredicted RBP17.05■□□□□ 0.32
PRKN-202ENST00000366892 PACSIN1Q9BY11 444 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 UCKL1Q9NWZ5 548 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 CTTNBP2NLQ9P2B4 639 aa17.05■□□□□ 0.32
PRKN-202ENST00000366892 SPTY2D1-AS1A0A0U1RR47 76 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 TMEM8BA6NDV4 472 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 CCDC188H7C350 402 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 ZNF185O15231 689 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 XPAP23025 273 aaPredicted RBP17.04■□□□□ 0.32
PRKN-202ENST00000366892 PFN3P60673 137 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 FZD2Q14332 565 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 SMAD1Q15797 465 aaKnown RBP17.04■□□□□ 0.32
PRKN-202ENST00000366892 TMEM52BQ4KMG9 183 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 C8orf74Q6P047 294 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 DHRS13Q6UX07 377 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 KDM7AQ6ZMT4 941 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 ZSWIM9Q86XI8 627 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 ZNF599Q96NL3 588 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 PSKH2Q96QS6 385 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 WRAP53Q9BUR4 548 aaKnown RBP17.04■□□□□ 0.32
PRKN-202ENST00000366892 ZMIZ1Q9ULJ6 1067 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 PCDHGA1Q9Y5H4 931 aa17.04■□□□□ 0.32
PRKN-202ENST00000366892 COL5A1P20908 1838 aaPredicted RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 KNTC1P50748 2209 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 GOLGA4Q13439 2230 aaKnown RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 TRIM38O00635 465 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 PIAS2O75928 621 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 KRT37O76014 449 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 MTA2O94776 668 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 SEC31AO94979 1220 aaKnown RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 PEX11BO96011 259 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 CD48P09326 243 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 C1SP09871 688 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 SSR1P43307 286 aaKnown RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 SCNN1BP51168 640 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 CDH6P55285 790 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 ELP6Q0PNE2 266 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 PDE1CQ14123 709 aaPredicted RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 LBRQ14739 615 aaKnown RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 HADHQ16836 314 aaKnown RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 ATP13A4Q4VNC1 1196 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 TPRG1LQ5T0D9 272 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 C11orf63Q6NUN7 778 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 BRAT1Q6PJG6 821 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 PEX26Q7Z412 305 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 MARCH9Q86YJ5 346 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 CPNE8Q86YQ8 564 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 GALNT15Q8N3T1 639 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 FAM71BQ8TC56 605 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 NSMCE3Q96MG7 304 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 NAP1L3Q99457 506 aaPredicted RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 ATP13A3Q9H7F0 1226 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 PCDH12Q9NPG4 1184 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 MED4Q9NPJ6 270 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 DNAJC28Q9NX36 388 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 UVRAGQ9P2Y5 699 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 SEPT3Q9UH03 358 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 AMFRQ9UKV5 643 aa17.03■□□□□ 0.32
PRKN-202ENST00000366892 TTC7AQ9ULT0 858 aaPredicted RBP17.03■□□□□ 0.32
PRKN-202ENST00000366892 MIF4GDA9UHW6 222 aaKnown RBP17.02■□□□□ 0.32
PRKN-202ENST00000366892 SIGLEC6O43699 453 aa17.02■□□□□ 0.32
PRKN-202ENST00000366892 MAFKO60675 156 aa17.02■□□□□ 0.32
PRKN-202ENST00000366892 PROSCO94903 275 aa17.02■□□□□ 0.32
PRKN-202ENST00000366892 CSF2P04141 144 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms