RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 SNRNP25Q9BV90 132 aaKnown RBP11.24□□□□□ -0.61
H3F3A-203ENST00000366815 CPEB1Q9BZB8 566 aaKnown RBP11.24□□□□□ -0.61
H3F3A-203ENST00000366815 DKK3Q9UBP4 350 aa11.24□□□□□ -0.61
H3F3A-203ENST00000366815 SPTY2D1-AS1A0A0U1RR47 76 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 TSPAN11A1L157 253 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 TGFBR3LH3BV60 316 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 J3KR12 359 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 NEMP1O14524 444 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 FPGTO14772 594 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 PRAMEF11O60813 436 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 SKILP12757 684 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 DESP17661 470 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 ITIH2P19823 946 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 MIPP30301 263 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 PBX1P40424 430 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 RABIFP47224 123 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 NDST2P52849 883 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 PFN3P60673 137 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 RAD51Q06609 339 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 CYP4F3Q08477 520 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 KLHL30Q0D2K2 578 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 LRRC73Q5JTD7 316 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 ERMARDQ5T6L9 678 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 HES3Q5TGS1 186 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 AFMIDQ63HM1 303 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 HGSNATQ68CP4 663 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 KDM7AQ6ZMT4 941 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 TTC7BQ86TV6 843 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 ARHGAP12Q8IWW6 846 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 RFFLQ8WZ73 363 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 CELF6Q96J87 481 aaKnown RBP11.23□□□□□ -0.61
H3F3A-203ENST00000366815 EXOC2Q96KP1 924 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 SLC39A8Q9C0K1 460 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 ISCUQ9H1K1 167 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
H3F3A-203ENST00000366815 DONSONQ9NYP3 566 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 UBA2Q9UBT2 640 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-203ENST00000366815 CNOT8Q9UFF9 292 aaKnown RBP11.23□□□□□ -0.61
H3F3A-203ENST00000366815 PCSK1NQ9UHG2 260 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 KLF15Q9UIH9 416 aa11.23□□□□□ -0.61
H3F3A-203ENST00000366815 LY6G6EA0A0G2JKS1 128 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 EEF2KO00418 725 aaKnown RBP11.22□□□□□ -0.61
H3F3A-203ENST00000366815 FFAR2O15552 330 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 LRP4O75096 1905 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 LRCH4O75427 683 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 RNF8O76064 485 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 PIGNO95427 931 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 CSF2P04141 144 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 NME1P15531 152 aaKnown RBP11.22□□□□□ -0.61
H3F3A-203ENST00000366815 ERCC2P18074 760 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 IGFALSP35858 605 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 RGRP47804 291 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 HNRNPKP61978 463 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■□□□ 12.9
H3F3A-203ENST00000366815 SNRPNP63162 240 aaKnown RBP11.22□□□□□ -0.61
H3F3A-203ENST00000366815 SGCGQ13326 291 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 KLHL40Q2TBA0 621 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 C11orf91Q3C1V1 193 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 ZNF542PQ5EBM4 170 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 RFX8Q6ZV50 586 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 PARGQ86W56 976 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
H3F3A-203ENST00000366815 COL27A1Q8IZC6 1860 aaPredicted RBP11.22□□□□□ -0.61
H3F3A-203ENST00000366815 NPWQ8N729 165 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 ZNF653Q96CK0 615 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 ABHD17AQ96GS6 310 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 CBX8Q9HC52 389 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 DNAJC28Q9NX36 388 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 NLGN3Q9NZ94 848 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 GDF2Q9UK05 429 aaPredicted RBP11.22□□□□□ -0.61
H3F3A-203ENST00000366815 SCINQ9Y6U3 715 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 U3KQA8 63 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 NBEAQ8NFP9 2946 aa11.22□□□□□ -0.61
H3F3A-203ENST00000366815 A0A1W2PQJ5 194 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 SYCE3A1L190 88 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 K7ESM1 405 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 SCAMP1O15126 338 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 PRPSAP2O60256 369 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 BUB1BO60566 1050 aaPredicted RBP11.21□□□□□ -0.61
H3F3A-203ENST00000366815 MMP20O60882 483 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 TM7SF2O76062 418 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 SERPINC1P01008 464 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 MYBL1P10243 752 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 CKMT1AP12532 417 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 JUPP14923 745 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 TCF4P15884 667 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 IL1R2P27930 398 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 HNF1BP35680 557 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 CSNK1DP48730 415 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 HCAR3P49019 387 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 PAPOLAP51003 745 aaKnown RBP11.21□□□□□ -0.61
H3F3A-203ENST00000366815 SUOXP51687 545 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 FANCCQ00597 558 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 EIF2B5Q13144 721 aaKnown RBP11.21□□□□□ -0.61
H3F3A-203ENST00000366815 TARDBPQ13148 414 aaKnown RBP eCLIP11.21□□□□□ -0.61
H3F3A-203ENST00000366815 DPYSQ14117 519 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 PDE1CQ14123 709 aaPredicted RBP11.21□□□□□ -0.61
H3F3A-203ENST00000366815 TMEM52BQ4KMG9 183 aa11.21□□□□□ -0.61
H3F3A-203ENST00000366815 COX20Q5RI15 118 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms