RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 SDR16C5Q8N3Y7 309 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 OR6K2Q8NGY2 324 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 PCDH19Q8TAB3 1148 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 KLHL32Q96NJ5 620 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 EPAS1Q99814 870 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 SEMA3CQ99985 751 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 CNPY3Q9BT09 278 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 C1QTNF7Q9BXJ2 289 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 SYNDIG1Q9H7V2 258 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 MBNL1Q9NR56 388 aaKnown RBP11.78□□□□□ -0.52
MRPL55-213ENST00000366740 CNOT8Q9UFF9 292 aaKnown RBP11.78□□□□□ -0.52
MRPL55-213ENST00000366740 FZD10Q9ULW2 581 aa11.78□□□□□ -0.52
MRPL55-213ENST00000366740 KRIT1O00522 736 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 NVLO15381 856 aaKnown RBP11.77□□□□□ -0.53
MRPL55-213ENST00000366740 SUV39H1O43463 412 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 POP4O95707 220 aaKnown RBP11.77□□□□□ -0.53
MRPL55-213ENST00000366740 ALPIP09923 528 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 HGFP14210 728 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.53
MRPL55-213ENST00000366740 MAPKAPK2P49137 400 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 PEX5P50542 639 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 HK3P52790 923 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 INHBCP55103 352 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 CCL7P80098 99 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-213ENST00000366740 IRF4Q15306 451 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 ELOCQ15369 112 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 TDRD12Q587J7 1177 aaKnown RBP11.77□□□□□ -0.53
MRPL55-213ENST00000366740 PPP1R2P3Q6NXS1 205 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 USP53Q70EK8 1073 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 OR6C4Q8NGE1 309 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 EXTL1Q92935 676 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 ZNF653Q96CK0 615 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 IQCDQ96DY2 449 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 TMEM74Q96NL1 305 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 FOXP3Q9BZS1 431 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 TRIM4Q9C037 500 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 STRADBQ9C0K7 418 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 TMEM248Q9NWD8 314 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 GPATCH2LQ9NWQ4 482 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 MYO1AQ9UBC5 1043 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 NENFQ9UMX5 172 aa11.77□□□□□ -0.53
MRPL55-213ENST00000366740 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.77□□□□□ -0.53
MRPL55-213ENST00000366740 BZW2Q9Y6E2 419 aaKnown RBP11.77□□□□□ -0.53
MRPL55-213ENST00000366740 ANKRD62A6NC57 917 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 TMEM110-MUSTN1A8MSY1 372 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 MMP20O60882 483 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 RPLP0P05388 317 aaKnown RBP11.76□□□□□ -0.53
MRPL55-213ENST00000366740 RHOQP17081 205 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 PSMA2P25787 234 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 AGERQ15109 404 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 CA9Q16790 459 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 ALG11Q2TAA5 492 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 MYLK3Q32MK0 819 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 LRRC73Q5JTD7 316 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 RWDD4Q6NW29 188 aaKnown RBP11.76□□□□□ -0.53
MRPL55-213ENST00000366740 GDPD4Q6W3E5 623 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 ATG14Q6ZNE5 492 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 CYP4V2Q6ZWL3 525 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-213ENST00000366740 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 VSTM4Q8IW00 320 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 RYBPQ8N488 228 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-213ENST00000366740 GPR156Q8NFN8 814 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 CXorf40AQ8TE69 158 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 SCG3Q8WXD2 468 aaKnown RBP11.76□□□□□ -0.53
MRPL55-213ENST00000366740 TMEM159Q96B96 161 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 PEBP4Q96S96 227 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 ARHGAP9Q9BRR9 750 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 CPEB1Q9BZB8 566 aaKnown RBP11.76□□□□□ -0.53
MRPL55-213ENST00000366740 THAP2Q9H0W7 228 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 MAGEH1Q9H213 219 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 LRRN3Q9H3W5 708 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 NOL6Q9H6R4 1146 aaKnown RBP11.76□□□□□ -0.53
MRPL55-213ENST00000366740 SIRPGQ9P1W8 387 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 DKK3Q9UBP4 350 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 GULP1Q9UBP9 304 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 DNAI1Q9UI46 699 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 DOLKQ9UPQ8 538 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 MFHAS1Q9Y4C4 1052 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 PCDHGA4Q9Y5G9 962 aa11.76□□□□□ -0.53
MRPL55-213ENST00000366740 CBFA2T2O43439 604 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 RASGRP1O95267 797 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 MYBL1P10243 752 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 SFTPCP11686 197 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 CTSEP14091 401 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 TCF4P15884 667 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 PNLIPP16233 465 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 ITIH1P19827 911 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 SUOXP51687 545 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 NFKB2Q00653 900 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 ZFP36L1Q07352 338 aaKnown RBP11.75□□□□□ -0.53
MRPL55-213ENST00000366740 NFATC4Q14934 902 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 ASTE1Q2TB18 679 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-213ENST00000366740 TMEM52BQ4KMG9 183 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 ATXN7L2Q5T6C5 722 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-213ENST00000366740 ALKBH5Q6P6C2 394 aaKnown RBP11.75□□□□□ -0.53
MRPL55-213ENST00000366740 TTC7BQ86TV6 843 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 GKN2Q86XP6 184 aa11.75□□□□□ -0.53
MRPL55-213ENST00000366740 DTX1Q86Y01 620 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms