RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TIE1P35590 1138 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 TUFMP49411 452 aaKnown RBP16.8■□□□□ 0.28
NID1-202ENST00000366595 NRG3P56975 720 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 PSMD5Q16401 504 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 USP41Q3LFD5 358 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 BRSK2Q8IWQ3 736 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 CDYL2Q8N8U2 506 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 SLC4A11Q8NBS3 891 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 SPATA20Q8TB22 786 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 CHST7Q9NS84 486 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.8■□□□□ 0.281e-8■■□□□ 13.8
NID1-202ENST00000366595 CLDN25C9JDP6 229 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 ERBB2P04626 1255 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 ITGAVP06756 1048 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 CXCL8P10145 99 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 NOS2P35228 1153 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 TAS2R41P59536 307 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 ADAM17P78536 824 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 LAMTOR4Q0VGL1 99 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 KCNN2Q9H2S1 579 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 HMGXB4Q9UGU5 601 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 SIN3BO75182 1162 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 S100A2P29034 98 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 TAPT1Q6NXT6 567 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 PLCZ1Q86YW0 608 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 ART4Q93070 314 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 TTLL2Q9BWV7 592 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 S100A14Q9HCY8 104 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 GMIPQ9P107 970 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 CLEC4AQ9UMR7 237 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 SPTLC1O15269 473 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 CES1P23141 567 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 PRKCIP41743 596 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 TOMM20Q15388 145 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 LIN52Q52LA3 116 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 NT5DC1Q5TFE4 455 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 WNT8BQ93098 351 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 COL26A1Q96A83 441 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 OR52E6Q96RD3 313 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 DHX33Q9H6R0 707 aaKnown RBP16.8■□□□□ 0.28
NID1-202ENST00000366595 LRRC19Q9H756 370 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 PCDHB12Q9Y5F1 795 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
NID1-202ENST00000366595 PDE2AO00408 941 aaPredicted RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 FGBP02675 491 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ZNF806P0C7X5 589 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 HUNKP57058 714 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 DEF8Q6ZN54 512 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 RTL4Q6ZR62 310 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 SEMA3GQ9NS98 782 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 TAS2R7Q9NYW3 318 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 PPIEQ9UNP9 301 aaKnown RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 PMF1-BGLAPU3KQ54 211 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 PGRP06401 933 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 POLR2EP19388 210 aaKnown RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 METTL7BQ6UX53 244 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 SLITRK4Q8IW52 837 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ZZZ3Q8IYH5 903 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 TMIEQ8NEW7 156 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 SNIP1Q8TAD8 396 aaKnown RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 TP53INP1Q96A56 240 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 TRNT1Q96Q11 434 aaKnown RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 MARCH7Q9H992 704 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 AASSQ9UDR5 926 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 FADS2O95864 444 aaKnown RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 GNRH1P01148 92 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 GPD2P43304 727 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 SLC7A2P52569 658 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 AP5B1Q2VPB7 878 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 RD3Q7Z3Z2 195 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 C10orf107Q8IVU9 208 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 RHOBTB2Q9BYZ6 727 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ZNF180Q9UJW8 692 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 LIASO43766 372 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 BUD31P41223 144 aaPredicted RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 SLC27A1Q6PCB7 646 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 QSOX2Q6ZRP7 698 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 UNC93AQ86WB7 457 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 RASAL3Q86YV0 1011 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 TMC8Q8IU68 726 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ASB8Q9H765 288 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 AGO4Q9HCK5 861 aaKnown RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 KCNE2Q9Y6J6 123 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 SIGLEC16A6NMB1 481 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 EDF1O60869 148 aaKnown RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 RB1P06400 928 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 TGFB3P10600 412 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ETS2P15036 469 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ATF4P18848 351 aaPredicted RBP16.79■□□□□ 0.28
NID1-202ENST00000366595 HNF4AP41235 474 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 MMP14P50281 582 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ZBTB6Q15916 424 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 WDR59Q6PJI9 974 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 ZNF567Q8N184 647 aa16.79■□□□□ 0.28
NID1-202ENST00000366595 MRPL9Q9BYD2 267 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms