RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ANTXRLA6NF34 631 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CCDC154A6NI56 674 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 MYMKA6NI61 221 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 TRDMT1O14717 391 aaKnown RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 DCLK1O15075 740 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 HUS1O60921 280 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ATG13O75143 517 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ATP2C2O75185 946 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ERN1O75460 977 aaKnown RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 EPN2O95208 641 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 IL18RAPO95256 599 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 GCNT3O95395 438 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 BMP15O95972 392 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CD1AP06126 327 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 KRT19P08727 400 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ZNF806P0C7X5 589 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CSH1P0DML2 217 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CSH2P0DML3 217 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ITGAMP11215 1152 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 IDEP14735 1019 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ABCD1P33897 745 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 DDIT3P35638 169 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 LONP1P36776 959 aaKnown RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 MPLP40238 635 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 RECQLP46063 649 aaPredicted RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 IFNAR2P48551 515 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CASP5P51878 434 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 HSD11B2P80365 405 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 SMARCB1Q12824 385 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 MTF1Q14872 753 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 POSTNQ15063 836 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCBP2Q15366 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 NFE2Q16621 373 aaPredicted RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 N4BP2L1Q5TBK1 243 aaPredicted RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 STPG1Q5TH74 334 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 B3GNTL1Q67FW5 361 aaPredicted RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 LMBRD2Q68DH5 695 aaPredicted RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 TCEAL6Q6IPX3 200 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ZNF720Q7Z2F6 126 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 MON1AQ86VX9 555 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 BRSK2Q8IWQ3 736 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 SCN4BQ8IWT1 228 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 SYCP3Q8IZU3 236 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 MIER2Q8N344 545 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CPA6Q8N4T0 437 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CSGALNACT2Q8N6G5 542 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 AOPEPQ8N6M6 819 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ARL14EPQ8N8R7 260 aaPredicted RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 RPLP0P6Q8NHW5 317 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 SLC9A6Q92581 669 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 TCEAL3Q969E4 200 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CAVIN3Q969G5 261 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 FUBP1Q96AE4 644 aaKnown RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 BOD1Q96IK1 185 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 P2RY13Q9BPV8 354 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 FGFBP2Q9BYJ0 223 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 ST6GALNAC4Q9H4F1 302 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 KIF9Q9HAQ2 790 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 TBCCD1Q9NVR7 557 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 DUS2Q9NX74 493 aaKnown RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 DDX43Q9NXZ2 648 aaKnown RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 RBAKQ9NYW8 714 aaPredicted RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 TESQ9UGI8 421 aaKnown RBP5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 GTF3C4Q9UKN8 822 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 L1RE1Q9UN81 338 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 PCDHA13Q9Y5I0 950 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 SNX9Q9Y5X1 595 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 CLIC4Q9Y696 253 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 WNT6Q9Y6F9 365 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 STYXL1Q9Y6J8 313 aa5.5□□□□□ -1.53
RNU4-4P-201ENST00000364588 MYOFQ9NZM1 2061 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 PTPRDP23468 1912 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 TRAV19A0A0A6YYK7 116 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 TCRBV7S2A1N4TA0A589 114 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 ANKRD62A6NC57 917 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 PPFIA2O75334 1257 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 NOL4O94818 638 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 SNUPNO95149 360 aaKnown RBP5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 ELANEP08246 267 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 DRD1P21728 446 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 PNPLA4P41247 253 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 DGKEP52429 567 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 LIMK1P53667 647 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 PSMC1P62191 440 aaKnown RBP5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 RPL10AP62906 217 aaKnown RBP5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 MYL7Q01449 175 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 CREB5Q02930 508 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 CEBPZQ03701 1054 aaKnown RBP5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 DMC1Q14565 340 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 PDGFRLQ15198 375 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 ZNF77Q15935 545 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 C3orf36Q3SXR2 165 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 PLK5Q496M5 336 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 L1TD1Q5T7N2 865 aaKnown RBP5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 RRAGBQ5VZM2 374 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 FAM173BQ6P4H8 233 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 TTC7BQ86TV6 843 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 SPATA2LQ8IUW3 424 aaPredicted RBP5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 ADGRF2Q8IZF7 708 aa5.49□□□□□ -1.53
RNU4-4P-201ENST00000364588 ABCA7Q8IZY2 2146 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms