RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 DCLK3Q9C098 648 aa4.4□□□□□ -1.71
RNU6-560P-201ENST00000364007 MRPL44Q9H9J2 332 aaKnown RBP4.4□□□□□ -1.71
RNU6-560P-201ENST00000364007 KRT84Q9NSB2 600 aa4.4□□□□□ -1.71
RNU6-560P-201ENST00000364007 OR6C3Q9NZP0 311 aa4.4□□□□□ -1.71
RNU6-560P-201ENST00000364007 IL36RNQ9UBH0 155 aa4.4□□□□□ -1.71
RNU6-560P-201ENST00000364007 CNOT8Q9UFF9 292 aaKnown RBP4.4□□□□□ -1.71
RNU6-560P-201ENST00000364007 A0A1W2PQF6 199 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 ASAP2O43150 1006 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 RNASEH2AO75792 299 aaKnown RBP4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 BSGP35613 385 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 PCYT1AP49585 367 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 PGGT1BP53609 377 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 SORDQ00796 357 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 ST3GAL1Q11201 340 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 CCNG2Q16589 344 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 MMEL1Q495T6 779 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLC45A4Q5BKX6 768 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 TTI2Q6NXR4 508 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 SHFQ7M4L6 423 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 TMEM116Q8NCL8 245 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 SMARCE1Q969G3 411 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 MMABQ96EY8 250 aaPredicted RBP4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 SF3B5Q9BWJ5 86 aaKnown RBP4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 STRA6Q9BX79 667 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 ESRP2Q9H6T0 727 aaKnown RBP4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 MKKSQ9NPJ1 570 aaPredicted RBP4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 ASAH2Q9NR71 780 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 HIF1ANQ9NWT6 349 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 LIMA1Q9UHB6 759 aaKnown RBP4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 AAR2Q9Y312 384 aaKnown RBP4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 ADAM18Q9Y3Q7 739 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 CEPT1Q9Y6K0 416 aa4.39□□□□□ -1.71
RNU6-560P-201ENST00000364007 IGHV4-28A0A0C4DH34 117 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 FAM237AA0A1B0GTK4 181 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 FAM90A10PA6NDY2 464 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 TTC36A6NLP5 189 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 HSPA12AO43301 675 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 VNN2O95498 520 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 NTN1O95631 604 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 DDX58O95786 925 aaKnown RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 MLYCDO95822 493 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 EIF2S1P05198 315 aaKnown RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 CYC1P08574 325 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 RARGP13631 454 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 PSMA4P25789 261 aaKnown RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 LMO1P25800 156 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 ITGB8P26012 769 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 CDC25AP30304 524 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 RPL3P39023 403 aaKnown RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 MXI1P50539 228 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 DRAP1Q14919 205 aaPredicted RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 SHBQ15464 509 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 DPCR1Q3MIW9 517 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 CXorf66Q5JRM2 361 aaPredicted RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 TYW3Q6IPR3 259 aaKnown RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 B3GNT6Q6ZMB0 384 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 CCDC129Q6ZRS4 1044 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 C9orf47Q6ZRZ4 202 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 MTSS1LQ765P7 747 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 CCDC13Q8IYE1 715 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 ADSSL1Q8N142 457 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 AADATQ8N5Z0 425 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 PDILTQ8N807 584 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 BEST2Q8NFU1 509 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 B4GALNT2Q8NHY0 566 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLITRK1Q96PX8 696 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 MAP7D2Q96T17 732 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 C1QTNF5Q9BXJ0 243 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 KCNN2Q9H2S1 579 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 PLEKHA5Q9HAU0 1116 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 FBRSL1Q9HCM7 1045 aaKnown RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 DIAPH3Q9NSV4 1193 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 ABI3Q9P2A4 366 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 SLCO3A1Q9UIG8 710 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 RCOR1Q9UKL0 485 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 CORO1CQ9ULV4 474 aaPredicted RBP4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 PCDHA7Q9UN72 937 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 UTYO14607 1347 aa4.38□□□□□ -1.71
RNU6-560P-201ENST00000364007 DYTNA2CJ06 578 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 TMEM202A6NGA9 273 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 ZIC3O60481 467 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 DOK2O60496 412 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 PTP4A3O75365 173 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 NDUFB4O95168 129 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 ALPLP05186 524 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 HOXB5P09067 269 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 HOXC6P09630 235 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 G6PDP11413 515 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 LAMP2P13473 410 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 KRT10P13645 584 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 CHATP28329 748 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 MLH1P40692 756 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 EIF2S3P41091 472 aaKnown RBP4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 AMTP48728 403 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 POLGP54098 1239 aaPredicted RBP4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 F2RL1P55085 397 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 FOXD4Q12950 439 aaPredicted RBP4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 TRAF3Q13114 568 aa4.37□□□□□ -1.71
RNU6-560P-201ENST00000364007 OLIG2Q13516 323 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms