RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CNKSR3Q6P9H4 555 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 TBC1D3Q8IZP1 549 aaPredicted RBP13.52□□□□□ -0.25
LDB3-202ENST00000361373 C12orf50Q8NA57 414 aaPredicted RBP13.52□□□□□ -0.25
LDB3-202ENST00000361373 NDNQ99608 321 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 USE1Q9NZ43 259 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
LDB3-202ENST00000361373 M0R2N6 131 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 DHX15O43143 795 aaKnown RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 ASLP04424 464 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 C8AP07357 584 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 PIRTP0C851 137 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 ADSSP30520 456 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 SOX6P35712 828 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 GBE1Q04446 702 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 TLE2Q04725 743 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 CACNG1Q06432 222 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 BST1Q10588 318 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 MAPKAPK3Q16644 382 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 AP5B1Q2VPB7 878 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 XKR6Q5GH73 641 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 GET4Q7L5D6 327 aaPredicted RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 C7orf61Q8IZ16 206 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 PRCCQ92733 491 aaPredicted RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 NTAN1Q96AB6 310 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 LENG1Q96BZ8 264 aaPredicted RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 FAM84AQ96KN4 292 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 HAPLN3Q96S86 360 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 SEPHS2Q99611 448 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 TCF25Q9BQ70 676 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 HPS4Q9NQG7 708 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 DLGAP2Q9P1A6 1054 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 FNIP2Q9P278 1114 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 RPS6KA6Q9UK32 745 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 MTF2Q9Y483 593 aaPredicted RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 SNED1Q8TER0 1413 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 ATG13O75143 517 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 PFKMP08237 780 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 CXCR3P49682 368 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 COPZ1P61923 177 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 FPGSQ05932 587 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 USP39Q53GS9 565 aaKnown RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 RNF43Q68DV7 783 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 FAM151BQ6UXP7 276 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 ADHFE1Q8IWW8 467 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 APOBEC3GQ9HC16 384 aaKnown RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 INSL6Q9Y581 213 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 SLC34A1Q06495 639 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 TRABD2AQ86V40 505 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 PHYKPLQ8IUZ5 450 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 RAVER1Q8IY67 606 aaKnown RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 SVOPQ8N4V2 548 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 DTNBP1Q96EV8 351 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 FBXL18Q96ME1 805 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 EIF4E1BA6NMX2 242 aaKnown RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 MEI4A8MW99 385 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 PER2O15055 1255 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 NDUFB5O43674 189 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 SMIM11AP58511 58 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 CAPN13Q6MZZ7 669 aaPredicted RBP13.51□□□□□ -0.25
LDB3-202ENST00000361373 WDR48Q8TAF3 677 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 TFAP2BQ92481 460 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 SUSD3Q96L08 255 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 TTYH3Q9C0H2 523 aa13.51□□□□□ -0.25
LDB3-202ENST00000361373 ISM1B1AKI9 464 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 ATG7O95352 703 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 SHBGP04278 402 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 UGT2B4P06133 528 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 PWP1Q13610 501 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 GSTA3Q16772 222 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 LSM12Q3MHD2 195 aaKnown RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 ANXA8L1Q5VT79 327 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 ZDHHC13Q8IUH4 622 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 DAW1Q8N136 415 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 LRRN4CLQ8ND94 238 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 RP9Q8TA86 221 aaKnown RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 SLC44A1Q8WWI5 657 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 DUS2Q9NX74 493 aaKnown RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 CPQQ9Y646 472 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 RBM47A0AV96 593 aaKnown RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 RGSL1A5PLK6 1076 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 F2P00734 622 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 IDO1P14902 403 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 NOS3P29474 1203 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 CBX2Q14781 532 aaPredicted RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 DNAJC14Q6Y2X3 702 aaPredicted RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 CAMKK1Q8N5S9 505 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 NAT16Q8N8M0 369 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 OR4K2Q8NGD2 314 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 GRIN2DO15399 1336 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 IRAK2O43187 625 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 ASPAP45381 313 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 CLK3P49761 638 aaKnown RBP13.5□□□□□ -0.25
LDB3-202ENST00000361373 C21orf59P57076 290 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 ABRQ12979 859 aa13.5□□□□□ -0.25
LDB3-202ENST00000361373 CCL14Q16627 93 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms