RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 ARMC3Q5W041 872 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 TRIM68Q6AZZ1 485 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 LRRC74BQ6ZQY2 392 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 MYLK4Q86YV6 388 aaPredicted RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 CCDC124Q96CT7 223 aaKnown RBP20.15■□□□□ 0.82
CHD1L-201ENST00000361293 SMIM14Q96QK8 99 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 NCKIPSDQ9NZQ3 722 aa20.15■□□□□ 0.82
CHD1L-201ENST00000361293 HMGA1P17096 107 aaKnown RBP20.14■□□□□ 0.82
CHD1L-201ENST00000361293 HLA-DPA1P20036 260 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 PIK3R1P27986 724 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 ACVR1Q04771 509 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 AGAP9Q5VTM2 703 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 ZNF549Q6P9A3 640 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 ZNF296Q8WUU4 475 aaPredicted RBP20.14■□□□□ 0.82
CHD1L-201ENST00000361293 CATSPER2Q96P56 530 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 TRIB3Q96RU7 358 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 CDH22Q9UJ99 828 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 FIS1Q9Y3D6 152 aa20.14■□□□□ 0.82
CHD1L-201ENST00000361293 CCDC162PA2VCL2 907 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 NPHS1O60500 1241 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 SLC4A1P02730 911 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 FGF1P05230 155 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 GCKP35557 465 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 VHLP40337 213 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 ALDH7A1P49419 539 aaKnown RBP20.14■□□□□ 0.81
CHD1L-201ENST00000361293 CLNS1AP54105 237 aaKnown RBP20.14■□□□□ 0.81
CHD1L-201ENST00000361293 ACBD5Q5T8D3 534 aaPredicted RBP20.14■□□□□ 0.81
CHD1L-201ENST00000361293 NXNQ6DKJ4 435 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 PGM2L1Q6PCE3 622 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 PIWIL4Q7Z3Z4 852 aaKnown RBP20.14■□□□□ 0.81
CHD1L-201ENST00000361293 GALNT7Q86SF2 657 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 ACTRT2Q8TDY3 377 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 PDCD6IPQ8WUM4 868 aaKnown RBP20.14■□□□□ 0.81
CHD1L-201ENST00000361293 FAM136AQ96C01 138 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 PHF21BQ96EK2 531 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 ZNF333Q96JL9 665 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 MGME1Q9BQP7 344 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 ZNF385DQ9H6B1 395 aa20.14■□□□□ 0.81
CHD1L-201ENST00000361293 NVLO15381 856 aaKnown RBP20.13■□□□□ 0.81
CHD1L-201ENST00000361293 GNRH1P01148 92 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 SERPINF2P08697 491 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 KPNA2P52292 529 aaKnown RBP20.13■□□□□ 0.81
CHD1L-201ENST00000361293 DNAJB13P59910 316 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 TIAL1Q01085 375 aaKnown RBP eCLIP20.13■□□□□ 0.816e-10■■■□□ 19.1
CHD1L-201ENST00000361293 BTKQ06187 659 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 C6orf163Q5TEZ5 329 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 ALG1LQ6GMV1 187 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 CLSTN3Q9BQT9 956 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 RNF38Q9H0F5 515 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 MAGEH1Q9H213 219 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 GTSE1Q9NYZ3 720 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 PPM1HQ9ULR3 514 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 CDYLQ9Y232 598 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 SPO11Q9Y5K1 396 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 EIF4E1BA6NMX2 242 aaKnown RBP20.13■□□□□ 0.81
CHD1L-201ENST00000361293 SCAMP3O14828 347 aaKnown RBP20.13■□□□□ 0.81
CHD1L-201ENST00000361293 STC2O76061 302 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 IPO13O94829 963 aaKnown RBP20.13■□□□□ 0.81
CHD1L-201ENST00000361293 IRF1P10914 325 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 PRDX6P30041 224 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 ABL2P42684 1182 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 SLC11A2P49281 568 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 SULT2A1Q06520 285 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 MUM1Q2TAK8 710 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 USP41Q3LFD5 358 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 ACAD11Q709F0 780 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 SNX32Q86XE0 403 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 HPS6Q86YV9 775 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 REM2Q8IYK8 340 aaPredicted RBP20.13■□□□□ 0.81
CHD1L-201ENST00000361293 DNAJC9Q8WXX5 260 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 TSPAN17Q96FV3 270 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 CNDP1Q96KN2 507 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 ALG9Q9H6U8 611 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 VTI1BQ9UEU0 232 aa20.13■□□□□ 0.81
CHD1L-201ENST00000361293 CD3EAPO15446 510 aaKnown RBP20.12■□□□□ 0.81
CHD1L-201ENST00000361293 CCNT2O60583 730 aaKnown RBP20.12■□□□□ 0.81
CHD1L-201ENST00000361293 TSPAN3O60637 253 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 CORO1AP31146 461 aaKnown RBP20.12■□□□□ 0.81
CHD1L-201ENST00000361293 HK2P52789 917 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 CDH4P55283 916 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 HECTD3Q5T447 861 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 GABPB2Q8TAK5 448 aaPredicted RBP20.12■□□□□ 0.81
CHD1L-201ENST00000361293 BRSK1Q8TDC3 778 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 ZNF599Q96NL3 588 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 HIPK3Q9H422 1215 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 PACSIN3Q9UKS6 424 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 ARHGAP26Q9UNA1 814 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 MICAL3Q7RTP6 2002 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 TANC1Q9C0D5 1861 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 C2orf78A6NCI8 922 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 SKAP2O75563 359 aaPredicted RBP20.12■□□□□ 0.81
CHD1L-201ENST00000361293 GLP2RO95838 553 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 SCNN1BP51168 640 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 TBL3Q12788 808 aaKnown RBP20.12■□□□□ 0.81
CHD1L-201ENST00000361293 ASPHQ12797 758 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 SCG3Q8WXD2 468 aaKnown RBP20.12■□□□□ 0.81
CHD1L-201ENST00000361293 PTERQ96BW5 349 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 ANKRD27Q96NW4 1050 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 PSKH2Q96QS6 385 aa20.12■□□□□ 0.81
CHD1L-201ENST00000361293 RTKNQ9BST9 563 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms