RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 GNA12Q03113 381 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 KLF10Q13118 480 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 CFAP157Q5JU67 520 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 RNF220Q5VTB9 566 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 KIAA1841Q6NSI8 718 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 FAM43BQ6ZT52 329 aaPredicted RBP22.71■■□□□ 1.23
LDB1-201ENST00000361198 LDB1Q86U70 411 aaPredicted RBP22.71■■□□□ 1.23
LDB1-201ENST00000361198 DEFB107AQ8IZN7 70 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 PHC3Q8NDX5 983 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 HEXDCQ8WVB3 486 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 PYDC1Q8WXC3 89 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 PPP2R3CQ969Q6 453 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 ILKAPQ9H0C8 392 aaPredicted RBP22.71■■□□□ 1.23
LDB1-201ENST00000361198 OR51F1A6NGY5 319 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 SLC7A4O43246 635 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 AHCYL1O43865 530 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 KLKB1P03952 638 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 SLC11A2P49281 568 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 ARL13AQ5H913 290 aaPredicted RBP22.71■■□□□ 1.23
LDB1-201ENST00000361198 HECTD3Q5T447 861 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 PDZD8Q8NEN9 1154 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 TRAPPC9Q96Q05 1148 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 RTKNQ9BST9 563 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 GKN1Q9NS71 199 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 ARHGAP26Q9UNA1 814 aa22.71■■□□□ 1.23
LDB1-201ENST00000361198 A0A087X1B8 175 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 LOC100653049A0A140TA62 436 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 H3BNC9 293 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 KRT34O76011 436 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 ASPHQ12797 758 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 NAIF1Q69YI7 327 aaPredicted RBP22.7■■□□□ 1.22
LDB1-201ENST00000361198 IL31Q6EBC2 164 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 FBXW8Q8N3Y1 598 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 CEP295NLQ96MC4 621 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 PRICKLE1Q96MT3 831 aaPredicted RBP22.7■■□□□ 1.22
LDB1-201ENST00000361198 TSC22D3Q99576 134 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 SHCBP1LQ9BZQ2 653 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 MAGEH1Q9H213 219 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 MRPL46Q9H2W6 279 aaKnown RBP22.7■■□□□ 1.22
LDB1-201ENST00000361198 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.7■■□□□ 1.22
LDB1-201ENST00000361198 AFF4Q9UHB7 1163 aaKnown RBP22.7■■□□□ 1.22
LDB1-201ENST00000361198 RAP2CQ9Y3L5 183 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 SMIM24O75264 130 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 PDE5AO76074 875 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 SORBS2O94875 1100 aaKnown RBP22.7■■□□□ 1.22
LDB1-201ENST00000361198 PIGNO95427 931 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 PRKAA2P54646 552 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 MTTPP55157 894 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 PRAMEP78395 509 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 CSHL1Q14406 222 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 GALNT3Q14435 633 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 TMC7Q7Z402 723 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 PDSS2Q86YH6 399 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 BLOC1S5Q8TDH9 187 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 SLC26A7Q8TE54 656 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 OVCA2Q8WZ82 227 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 FEM1CQ96JP0 617 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 CCDC28BQ9BUN5 200 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 MFSD1Q9H3U5 465 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 IGSF5Q9NSI5 407 aa22.7■■□□□ 1.22
LDB1-201ENST00000361198 MARCH4Q9P2E8 410 aaPredicted RBP22.7■■□□□ 1.22
LDB1-201ENST00000361198 SGSHP51688 502 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 CLCN5P51795 746 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 CDH4P55283 916 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 PTPRCAPQ14761 206 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 KLHDC10Q6PID8 442 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 ZNF461Q8TAF7 563 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 GABPB2Q8TAK5 448 aaPredicted RBP22.69■■□□□ 1.22
LDB1-201ENST00000361198 SGF29Q96ES7 293 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 CNDP1Q96KN2 507 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 TBATAQ96M53 351 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 ZNF599Q96NL3 588 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 MRPL57Q9BQC6 102 aaKnown RBP22.69■■□□□ 1.22
LDB1-201ENST00000361198 SPON2Q9BUD6 331 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 SUDS3Q9H7L9 328 aaPredicted RBP22.69■■□□□ 1.22
LDB1-201ENST00000361198 CYP4F11Q9HBI6 524 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 OGDHLQ9ULD0 1010 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 ARL5AQ9Y689 179 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 ENO4A6NNW6 628 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 MATN2O00339 956 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 HLA-DPA1P20036 260 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 RPL14P50914 215 aaKnown RBP22.69■■□□□ 1.22
LDB1-201ENST00000361198 HK2P52789 917 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 XIAPP98170 497 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 TBL3Q12788 808 aaKnown RBP22.69■■□□□ 1.22
LDB1-201ENST00000361198 CUL3Q13618 768 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 ANKRD33Q7Z3H0 272 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 LSMEM2Q8N112 164 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 STON2Q8WXE9 905 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 RNF38Q9H0F5 515 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 TCF7L2Q9NQB0 619 aa22.69■■□□□ 1.22
LDB1-201ENST00000361198 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.69■■□□□ 1.22
LDB1-201ENST00000361198 LAMA2P24043 3122 aaKnown RBP22.69■■□□□ 1.22
LDB1-201ENST00000361198 E9PBE3 544 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 KLHL41O60662 606 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 STC2O76061 302 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 FGF1P05230 155 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 SERPINF2P08697 491 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 PIRTP0C851 137 aa22.68■■□□□ 1.22
LDB1-201ENST00000361198 CORO1AP31146 461 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms