RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 C12orf56Q8IXR9 622 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 FBXL13Q8NEE6 735 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SLC7A14Q8TBB6 771 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 RAB3IL1Q8TBN0 382 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 VPS50Q96JG6 964 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 GAD1Q99259 594 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 PKP2Q99959 881 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SH2D3AQ9BRG2 576 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 DCUN1D5Q9BTE7 237 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SMOC2Q9H3U7 446 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TASP1Q9H6P5 420 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TMEM9BQ9NQ34 198 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 GPRC5CQ9NQ84 441 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SMYD2Q9NRG4 433 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 PNPOQ9NVS9 261 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 APOBEC2Q9Y235 224 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 TTLL3Q9Y4R7 772 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SPO11Q9Y5K1 396 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 BRWD1Q9NSI6 2320 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 BCLAF3A2AJT9 711 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 ARHGEF35A5YM69 484 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 NT5C1B-RDH14C9J2C7 533 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 CYP11A1P05108 521 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 ATP5BP06576 529 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 ARF4P18085 180 aaPredicted RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 EPHA3P29320 983 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 IDH3AP50213 366 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 ATXN3P54252 364 aaPredicted RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 CDH15P55291 814 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 NOMO3P69849 1222 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 BASP1P80723 227 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 DMPKQ09013 629 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 VEPH1Q14D04 833 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 UPP1Q16831 310 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 DCAF6Q58WW2 860 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TEDDM1Q5T9Z0 273 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 FAM171A1Q5VUB5 890 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 PLA2G4FQ68DD2 849 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 PDPK2PQ6A1A2 396 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 OGFOD2Q6N063 350 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 C16orf46Q6P387 395 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SLC2A7Q6PXP3 512 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 ALKAL1Q6UXT8 129 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 DCDC5Q6ZRR9 648 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SLC26A11Q86WA9 606 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 FEZF2Q8TBJ5 459 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 GIMAP1Q8WWP7 306 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 LPPQ93052 612 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SPACA7Q96KW9 195 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 HEPHQ9BQS7 1158 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 LXNQ9BS40 222 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 GPR62Q9BZJ7 368 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 PAIP1Q9H074 479 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 KLC2Q9H0B6 622 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TMEM8AQ9HCN3 771 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 THAP1Q9NVV9 213 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SUSD2Q9UGT4 822 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TBX20Q9UMR3 447 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TEX264Q9Y6I9 313 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SZT2Q5T011 3432 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 K7EPI3 171 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 MATN2O00339 956 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 GSRP00390 522 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SNRPAP09012 282 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 NCF2P19878 526 aaPredicted RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 RPL10P27635 214 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 RPL10AP62906 217 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 CAPSQ13938 189 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TFDP3Q5H9I0 405 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 ZPBP2Q6X784 338 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 SV2AQ7L0J3 742 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 CHERPQ8IWX8 916 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 ADGRF2Q8IZF7 708 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 DCLK2Q8N568 766 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 AUTS2Q8WXX7 1259 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 TRMT2BQ96GJ1 504 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 OSBPL10Q9BXB5 764 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 PLAC1Q9HBJ0 212 aa7.78□□□□□ -1.16
CCL28-201ENST00000361115 RANBP2P49792 3224 aaKnown RBP7.78□□□□□ -1.16
CCL28-201ENST00000361115 NOTCH4Q99466 2003 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 LINC00854A0A1B0GVQ3 168 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 HMX2A2RU54 273 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 C7orf72A4D263 438 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 SHISA7A6NL88 538 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 KHNYNO15037 678 aaKnown RBP7.77□□□□□ -1.17
CCL28-201ENST00000361115 SLC16A4O15374 487 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 ZBTB14O43829 449 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 POMCP01189 267 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 OCM2P0CE71 109 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 OCMP0CE72 109 aaPredicted RBP7.77□□□□□ -1.17
CCL28-201ENST00000361115 COX4I1P13073 169 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 PTPN1P18031 435 aaKnown RBP7.77□□□□□ -1.17
CCL28-201ENST00000361115 XRCC1P18887 633 aaPredicted RBP7.77□□□□□ -1.17
CCL28-201ENST00000361115 ARRB2P32121 409 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 EIF2B5Q13144 721 aaKnown RBP7.77□□□□□ -1.17
CCL28-201ENST00000361115 MAP7D1Q3KQU3 841 aa7.77□□□□□ -1.17
CCL28-201ENST00000361115 FASTKD1Q53R41 847 aaKnown RBP7.77□□□□□ -1.17
CCL28-201ENST00000361115 XKR9Q5GH70 373 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms