RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 ROPN1Q9HAT0 212 aaPredicted RBP16.69■□□□□ 0.26
SDCBP2-202ENST00000360779 ZFATQ9P243 1243 aa16.69■□□□□ 0.26
SDCBP2-202ENST00000360779 TXNDC16Q9P2K2 825 aa16.69■□□□□ 0.26
SDCBP2-202ENST00000360779 SPO11Q9Y5K1 396 aa16.69■□□□□ 0.26
SDCBP2-202ENST00000360779 ARL5AQ9Y689 179 aa16.69■□□□□ 0.26
SDCBP2-202ENST00000360779 NFS1Q9Y697 457 aa16.69■□□□□ 0.26
SDCBP2-202ENST00000360779 WASF2Q9Y6W5 498 aa16.69■□□□□ 0.26
SDCBP2-202ENST00000360779 ANTXRLA6NF34 631 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 C1QTNF3-AMACRE9PGA6 284 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 K7EQS6 105 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 RGS16O15492 202 aaPredicted RBP16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 RNASEH1O60930 286 aaKnown RBP16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 PIAS1O75925 651 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 IL1BP01584 269 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 INHBAP08476 426 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 GLULP15104 373 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 PRAMEP78395 509 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 MGAT5Q09328 741 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 ELAVL3Q14576 367 aaKnown RBP16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 STARD3Q14849 445 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 TMED2Q15363 201 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 TAF1AQ15573 450 aaPredicted RBP16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 C9orf64Q5T6V5 341 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 FSTL4Q6MZW2 842 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 ESRP1Q6NXG1 681 aaKnown RBP16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 BRAT1Q6PJG6 821 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 TMEM135Q86UB9 458 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 KCNMB4Q86W47 210 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 PIH1D2Q8WWB5 315 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 PPP1R16AQ96I34 528 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 ZNF778Q96MU6 729 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 SRPK1Q96SB4 655 aaKnown RBP16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 TMEM245Q9H330 911 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 SLC2A4RGQ9NR83 387 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 IL1RAPL1Q9NZN1 696 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 PRKAG3Q9UGI9 489 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 SLC2A6Q9UGQ3 507 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 CA14Q9ULX7 337 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 NDRG2Q9UN36 371 aaKnown RBP16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 STARD13Q9Y3M8 1113 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 ZNF711Q9Y462 761 aa16.68■□□□□ 0.26
SDCBP2-202ENST00000360779 A0A0J9YYE9 177 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 C1orf232A0A0U1RR37 186 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 A8MX80 341 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 AGPSO00116 658 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 STX7O15400 261 aaKnown RBP16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 TRBC1P01850 177 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 CTSLP07711 333 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 ERVK-10P10266 1014 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 HNRNPLP14866 589 aaKnown RBP eCLIP16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 PSMD8P48556 350 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 PDE1BQ01064 536 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 CNGA3Q16281 694 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 TMEM196Q5HYL7 178 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 LRRC73Q5JTD7 316 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 ARMC3Q5W041 872 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 PDPK2PQ6A1A2 396 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 TRMT11Q7Z4G4 463 aaKnown RBP16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 UNC5BQ8IZJ1 945 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 OR6P1Q8NGX9 317 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 GABPB2Q8TAK5 448 aaPredicted RBP16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 PIP4K2CQ8TBX8 421 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 PAFAH2Q99487 392 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 PPCSQ9HAB8 311 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 IARS2Q9NSE4 1012 aaKnown RBP16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 TBK1Q9UHD2 729 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 FBXL21Q9UKT6 434 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 DUSP12Q9UNI6 340 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 FNDC3AQ9Y2H6 1198 aaKnown RBP16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 PKP3Q9Y446 797 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 KCTD3Q9Y597 815 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 C5orf42Q9H799 3197 aa16.67■□□□□ 0.26
SDCBP2-202ENST00000360779 CAPN8A6NHC0 703 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 VAPBO95292 243 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 KLF8O95600 359 aaPredicted RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 CYP2A6P11509 494 aaPredicted RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 LPOP22079 712 aaPredicted RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 NTSR1P30989 418 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 HNF1BP35680 557 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 SEMG2Q02383 582 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 PTPRRQ15256 657 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 MLF2Q15773 248 aaPredicted RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 ZNF805Q5CZA5 627 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 IER5LQ5T953 404 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 LYSMD3Q7Z3D4 306 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 ZSWIM9Q86XI8 627 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 CACUL1Q86Y37 369 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 MMAAQ8IVH4 418 aaKnown RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 MDGA1Q8NFP4 955 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 STYXQ8WUJ0 223 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 DNAJC1Q96KC8 554 aaKnown RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 STMN4Q9H169 189 aaPredicted RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 TRABDQ9H4I3 376 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 MAGEE1Q9HCI5 957 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 MED4Q9NPJ6 270 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 PRSS16Q9NQE7 514 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 POLR3BQ9NW08 1133 aaPredicted RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 PSMC3IPQ9P2W1 217 aaPredicted RBP16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 SLC24A2Q9UI40 661 aa16.66■□□□□ 0.26
SDCBP2-202ENST00000360779 ZCWPW2A0A1B0GU75 182 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms