RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 F8W8V4 182 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 SPECC1L-ADORA2AF8WAN1 911 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 SLC9A3R1O14745 358 aaPredicted RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 MUSKO15146 869 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 USP12O75317 370 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 CIB2O75838 187 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 MT-CYBP00156 380 aaPredicted RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 BPGMP07738 259 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 TCF3P15923 654 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 VIPR2P41587 438 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 ABL2P42684 1182 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 KLC1Q07866 573 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 TNK2Q07912 1038 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 ACSBG2Q5FVE4 666 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 CELF5Q8N6W0 485 aaKnown RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 IPMKQ8NFU5 416 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 OR52K1Q8NGK4 314 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 PPP1R14CQ8TAE6 165 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 ACMSDQ8TDX5 336 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 CDKL2Q92772 493 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 FGF13Q92913 245 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 ALG14Q96F25 216 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 FEM1AQ9BSK4 669 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 VPS45Q9NRW7 570 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 THAP1Q9NVV9 213 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 STX18Q9P2W9 335 aaKnown RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 TAGLN3Q9UI15 199 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 OR51B4Q9Y5P0 310 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 WNT6Q9Y6F9 365 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 MYLKQ15746 1914 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 SNAP91O60641 907 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 TBX10O75333 385 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 PMPCBO75439 489 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 FSHRP23945 695 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 MGAT1P26572 445 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 NPY2RP49146 381 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 CDH17Q12864 832 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 GRIN2CQ14957 1233 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 FAM78AQ5JUQ0 283 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 ANO7Q6IWH7 933 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 GET4Q7L5D6 327 aaPredicted RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 WDR75Q8IWA0 830 aaKnown RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 KLHDC8BQ8IXV7 354 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 MPP5Q8N3R9 675 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 ATP2A3Q93084 1043 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 OTUB2Q96DC9 234 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 IMP4Q96G21 291 aaKnown RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 RILPQ96NA2 401 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 TBL1YQ9BQ87 522 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 TRIM56Q9BRZ2 755 aaKnown RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 MECRQ9BV79 373 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 CASS4Q9NQ75 786 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 SMYD2Q9NRG4 433 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 PCMTD2Q9NV79 361 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 KIAA1522Q9P206 1035 aaPredicted RBP13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 ANGPTL2Q9UKU9 493 aa13.25□□□□□ -0.29
SQSTM1-201ENST00000360718 CAPN14A8MX76 684 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 SNNO75324 88 aaPredicted RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 CD160O95971 181 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 CSKP41240 450 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 AQP5P55064 265 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 SESN3P58005 492 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ARF5P84085 180 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ADAM15Q13444 863 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 BMPR2Q13873 1038 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ADGRE1Q14246 886 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 MROH9Q5TGP6 573 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 NET1Q7Z628 596 aaPredicted RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ALYREFQ86V81 257 aaKnown RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ZNF557Q8N988 423 aaPredicted RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 C2orf49Q9BVC5 232 aaPredicted RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 VCXQ9H320 206 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 FAM96AQ9H5X1 160 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ARMCX1Q9P291 453 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 LRCH1Q9Y2L9 728 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 CCDC189A1A4V9 331 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 KRT36O76013 467 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ENO1P06733 434 aaKnown RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 SERPINA6P08185 405 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 WEE1P30291 646 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 CD86P42081 329 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 NIPAL4Q0D2K0 466 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 NAB1Q13506 487 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 IRGCQ6NXR0 463 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 LINGO4Q6UY18 593 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 LRRC74BQ6ZQY2 392 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 TTC7BQ86TV6 843 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 APCDD1Q8J025 514 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 FIBINQ8TAL6 211 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 PRR11Q96HE9 360 aaPredicted RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 ASB16Q96NS5 453 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 APOL2Q9BQE5 337 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 FICDQ9BVA6 458 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 IL22Q9GZX6 179 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 STN1Q9H668 368 aaKnown RBP13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 NMRK1Q9NWW6 199 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 MOCS1Q9NZB8 636 aa13.24□□□□□ -0.29
SQSTM1-201ENST00000360718 MAGEB16A2A368 324 aa13.23□□□□□ -0.29
SQSTM1-201ENST00000360718 MAP3K7O43318 606 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms