RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 PCCBP05166 539 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 HGFP14210 728 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 PNLIPP16233 465 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 RGRP47804 291 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 RPL7AP62424 266 aaKnown RBP23.17■■□□□ 1.3
YIF1A-201ENST00000359461 ZFP36L1Q07352 338 aaKnown RBP23.17■■□□□ 1.3
YIF1A-201ENST00000359461 DNAJC24Q6P3W2 148 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 SCYL2Q6P3W7 929 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 CAMK1DQ8IU85 385 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 PLA2G15Q8NCC3 412 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 OR1E3Q8WZA6 343 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 ECHDC3Q96DC8 303 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 MCEEQ96PE7 176 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 CNPY3Q9BT09 278 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 FGF22Q9HCT0 170 aa23.17■■□□□ 1.3
YIF1A-201ENST00000359461 NVLO15381 856 aaKnown RBP23.16■■□□□ 1.3
YIF1A-201ENST00000359461 TNFP01375 233 aa23.16■■□□□ 1.3
YIF1A-201ENST00000359461 GLB1P16278 677 aa23.16■■□□□ 1.3
YIF1A-201ENST00000359461 NDST2P52849 883 aa23.16■■□□□ 1.3
YIF1A-201ENST00000359461 SPRED1Q7Z699 444 aa23.16■■□□□ 1.3
YIF1A-201ENST00000359461 FUBP1Q96AE4 644 aaKnown RBP23.16■■□□□ 1.3
YIF1A-201ENST00000359461 LOXL2Q9Y4K0 774 aa23.16■■□□□ 1.3
YIF1A-201ENST00000359461 GTF3C3Q9Y5Q9 886 aa23.16■■□□□ 1.3
YIF1A-201ENST00000359461 TMEM202A6NGA9 273 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 TNFRSF10CO14798 259 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 PRKCGP05129 697 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 HOXC4P09017 264 aaPredicted RBP23.15■■□□□ 1.3
YIF1A-201ENST00000359461 LIPCP11150 499 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 GM2AP17900 193 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 TPI1P60174 286 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 TGIF1Q15583 401 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 LINC00303Q3SY05 128 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 FKBP15Q5T1M5 1219 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 CFAP58Q5T655 872 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 JAMLQ86YT9 394 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 EXD3Q8N9H8 876 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 OR56A4Q8NGH8 313 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 TMEM159Q96B96 161 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 CLMPQ9H6B4 373 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 ATP13A3Q9H7F0 1226 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 DONSONQ9NYP3 566 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 PISDQ9UG56 409 aa23.15■■□□□ 1.3
YIF1A-201ENST00000359461 ANKRD62A6NC57 917 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SLC28A2O43868 658 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 RECQL5O94762 991 aaPredicted RBP23.14■■□□□ 1.29
YIF1A-201ENST00000359461 JMJD7P0C870 316 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SERPINA4P29622 427 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 TRIM23P36406 574 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 OGDHQ02218 1023 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SRSF6Q13247 344 aaKnown RBP23.14■■□□□ 1.29
YIF1A-201ENST00000359461 HLTFQ14527 1009 aaKnown RBP eCLIP23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SYCP1Q15431 976 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 C14orf28Q4W4Y0 310 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 AFMIDQ63HM1 303 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 XKR5Q6UX68 686 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 LIPIQ6XZB0 460 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SRLQ86TD4 932 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SLITRK4Q8IW52 837 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 TSEN2Q8NCE0 465 aaKnown RBP23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SGF29Q96ES7 293 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 SDK2Q58EX2 2172 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 PTPN13Q12923 2485 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 NAV2Q8IVL1 2488 aa23.14■■□□□ 1.29
YIF1A-201ENST00000359461 CACNB4O00305 520 aaPredicted RBP23.13■■□□□ 1.29
YIF1A-201ENST00000359461 ITGB2P05107 769 aa23.13■■□□□ 1.29
YIF1A-201ENST00000359461 TPM2P07951 284 aa23.13■■□□□ 1.29
YIF1A-201ENST00000359461 DPPA4Q7L190 304 aa23.13■■□□□ 1.29
YIF1A-201ENST00000359461 SFTPA2Q8IWL1 248 aa23.13■■□□□ 1.29
YIF1A-201ENST00000359461 SPOCK2Q92563 424 aa23.13■■□□□ 1.29
YIF1A-201ENST00000359461 CELF6Q96J87 481 aaKnown RBP23.13■■□□□ 1.29
YIF1A-201ENST00000359461 SLC39A8Q9C0K1 460 aa23.13■■□□□ 1.29
YIF1A-201ENST00000359461 MRPL40Q9NQ50 206 aaKnown RBP23.13■■□□□ 1.29
YIF1A-201ENST00000359461 RNF215Q9Y6U7 377 aa23.13■■□□□ 1.29
YIF1A-201ENST00000359461 BSNQ9UPA5 3926 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 ARHGAP42A6NI28 874 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 EIF3CLB5ME19 914 aaKnown RBP23.12■■□□□ 1.29
YIF1A-201ENST00000359461 PYCARD-AS1I3L0S3 204 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 NUDT21O43809 227 aaKnown RBP23.12■■□□□ 1.29
YIF1A-201ENST00000359461 ELFN1P0C7U0 828 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 KRT10P13645 584 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 ITIH1P19827 911 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 KELP23276 732 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 PAPOLAP51003 745 aaKnown RBP23.12■■□□□ 1.29
YIF1A-201ENST00000359461 TMPRSS9Q7Z410 1059 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 TAF8Q7Z7C8 310 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 ARHGAP12Q8IWW6 846 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 Q8N9G6 341 aaPredicted RBP23.12■■□□□ 1.29
YIF1A-201ENST00000359461 FAM46DQ8NEK8 389 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 EIF3CQ99613 913 aaKnown RBP23.12■■□□□ 1.29
YIF1A-201ENST00000359461 AGPAT1Q99943 283 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 TMEM168Q9H0V1 697 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 GPATCH2LQ9NWQ4 482 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 AP4E1Q9UPM8 1137 aa23.12■■□□□ 1.29
YIF1A-201ENST00000359461 ZFC3H1O60293 1989 aaKnown RBP23.12■■□□□ 1.29
YIF1A-201ENST00000359461 PRAMEF33A0A0G2JMD5 474 aa23.11■■□□□ 1.29
YIF1A-201ENST00000359461 TRAFD1O14545 582 aaPredicted RBP23.11■■□□□ 1.29
YIF1A-201ENST00000359461 PRAMEF10O60809 474 aa23.11■■□□□ 1.29
YIF1A-201ENST00000359461 ETV5P41161 510 aa23.11■■□□□ 1.29
YIF1A-201ENST00000359461 COPB1P53618 953 aaKnown RBP23.11■■□□□ 1.29
YIF1A-201ENST00000359461 SPECC1LQ69YQ0 1117 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms