RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 IHHQ14623 411 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 TCHHL1Q5QJ38 904 aaPredicted RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 RARS2Q5T160 578 aaKnown RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 NCCRP1Q6ZVX7 275 aaPredicted RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 FCRL3Q96P31 734 aaPredicted RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 GBA3Q9H227 469 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 MRPL17Q9NRX2 175 aaKnown RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 APPL1Q9UKG1 709 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 YIPF1Q9Y548 306 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 SH3PXD2BA1X283 911 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 CCDC78A2IDD5 438 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 NRG2O14511 850 aaPredicted RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 TRDMT1O14717 391 aaKnown RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 IGLV3-27P01718 113 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 PPM1AP35813 382 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 CD151P48509 253 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 TRIP4Q15650 581 aaPredicted RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 CERCAMQ5T4B2 595 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 AFMIDQ63HM1 303 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 DHRS4L2Q6PKH6 230 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 C4orf22Q6V702 233 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 PDZD4Q76G19 769 aaPredicted RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 CFAP52Q8N1V2 620 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 PIWIL2Q8TC59 973 aaKnown RBP18.72■□□□□ 0.59
SNX11-201ENST00000359238 ATP2A3Q93084 1043 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 CNBD2Q96M20 576 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 BIRC8Q96P09 236 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 SLC13A1Q9BZW2 595 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 GKN1Q9NS71 199 aa18.72■□□□□ 0.59
SNX11-201ENST00000359238 PLXNA4Q9HCM2 1894 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 EYSQ5T1H1 3165 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 NCAM2O15394 837 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 TEX28O15482 410 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 GJB3O75712 270 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 ZNF189O75820 626 aaPredicted RBP18.71■□□□□ 0.59
SNX11-201ENST00000359238 PEX11BO96011 259 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 MYL4P12829 197 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 PORP16435 677 aaPredicted RBP18.71■□□□□ 0.59
SNX11-201ENST00000359238 PRKCHP24723 683 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 SLC6A4P31645 630 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 HSPA13P48723 471 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 IYDQ6PHW0 289 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 ATPAF2Q8N5M1 289 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 OR52K2Q8NGK3 314 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 HMCESQ96FZ2 354 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 ZNF512Q96ME7 567 aaPredicted RBP18.71■□□□□ 0.59
SNX11-201ENST00000359238 ZNF778Q96MU6 729 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 KLHL5Q96PQ7 755 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 TTLL2Q9BWV7 592 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 RNF38Q9H0F5 515 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 RSL24D1Q9UHA3 163 aaKnown RBP18.71■□□□□ 0.59
SNX11-201ENST00000359238 ACTL7AQ9Y615 435 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 PSAT1Q9Y617 370 aa18.71■□□□□ 0.59
SNX11-201ENST00000359238 C2orf78A6NCI8 922 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 PRRG1O14668 218 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 AP2A1O95782 977 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 TOP3BO95985 862 aaKnown RBP18.71■□□□□ 0.58
SNX11-201ENST00000359238 HLA-DQB2P05538 268 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 MX2P20592 715 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 CRHR1P34998 444 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 GMPRP36959 345 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 KDELC2Q7Z4H8 507 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 TICAM1Q8IUC6 712 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 C1orf74Q96LT6 269 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 PLGRKTQ9HBL7 147 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 EIF2B3Q9NR50 452 aaKnown RBP18.71■□□□□ 0.58
SNX11-201ENST00000359238 FAF1Q9UNN5 650 aaPredicted RBP18.71■□□□□ 0.58
SNX11-201ENST00000359238 INSL6Q9Y581 213 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 PCDHA11Q9Y5I1 949 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 RAD54BQ9Y620 910 aa18.71■□□□□ 0.58
SNX11-201ENST00000359238 KANSL1LA0AUZ9 987 aa18.7■□□□□ 0.58
SNX11-201ENST00000359238 CDK9P50750 372 aaKnown RBP18.7■□□□□ 0.58
SNX11-201ENST00000359238 ISLR2Q6UXK2 745 aa18.7■□□□□ 0.58
SNX11-201ENST00000359238 PATL1Q86TB9 770 aaKnown RBP18.7■□□□□ 0.58
SNX11-201ENST00000359238 ADCY4Q8NFM4 1077 aa18.7■□□□□ 0.58
SNX11-201ENST00000359238 FAM96AQ9H5X1 160 aa18.7■□□□□ 0.58
SNX11-201ENST00000359238 CATSPERBQ9H7T0 1116 aa18.7■□□□□ 0.58
SNX11-201ENST00000359238 ZNF711Q9Y462 761 aa18.7■□□□□ 0.58
SNX11-201ENST00000359238 ZNF840PA6NDX5 716 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 COCHO43405 550 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 KLKB1P03952 638 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 SGSHP51688 502 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 TWF1Q12792 350 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 PLD1Q13393 1074 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 RAB33AQ14088 237 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 ADGRE1Q14246 886 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 TPGS2Q68CL5 300 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 PSRC1Q6PGN9 363 aaPredicted RBP18.69■□□□□ 0.58
SNX11-201ENST00000359238 PACS1Q6VY07 963 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 SPRED2Q7Z698 418 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 HERC6Q8IVU3 1022 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 GSDMBQ8TAX9 411 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 RIN3Q8TB24 985 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 LRGUKQ96M69 825 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 FRMD8Q9BZ67 464 aaPredicted RBP18.69■□□□□ 0.58
SNX11-201ENST00000359238 ZBP1Q9H171 429 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 ATXN3LQ9H3M9 355 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 MOCS1Q9NZB8 636 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 DNAJC16Q9Y2G8 782 aa18.69■□□□□ 0.58
SNX11-201ENST00000359238 OBSL1O75147 1896 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms