RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ARHGEF6Q15052 776 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ANKS6Q68DC2 871 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 PM20D1Q6GTS8 502 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 FAM45BPQ6NSW5 357 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 PIM3Q86V86 326 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ENDOVQ8N8Q3 282 aaKnown RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 OR4L1Q8NH43 312 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 FAM45AQ8TCE6 357 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 NT5C3BQ969T7 300 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 NUMBLQ9Y6R0 609 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 CAPN8A6NHC0 703 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 GSTA4O15217 222 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 TRIM16O95361 564 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 SLC35E2BP0CK96 405 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 TACR2P21452 398 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 IL10P22301 178 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 RAP1GDS1P52306 607 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 KCNK10P57789 538 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 MSLNQ13421 630 aaPredicted RBP11.23□□□□□ -0.61
SSU72-202ENST00000359060 NRF1Q16656 503 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 XKR4Q5GH76 650 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 ANO7Q6IWH7 933 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 SLC30A9Q6PML9 568 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 LINGO4Q6UY18 593 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 ZNF276Q8N554 614 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 DCBLD1Q8N8Z6 715 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 DDI1Q8WTU0 396 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 CNDP1Q96KN2 507 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 TRIM15Q9C019 465 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 PCDHGC4Q9Y5F7 938 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 GATMP50440 423 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 RALGDSQ12967 914 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 MS4A13Q5J8X5 152 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 HECTD3Q5T447 861 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 EPGNQ6UW88 154 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 SH2D5Q6ZV89 423 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 PDZD8Q8NEN9 1154 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 OR6K2Q8NGY2 324 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 SPPL2BQ8TCT7 592 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 ADGRE3Q9BY15 652 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 VCX3AQ9NNX9 186 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
SSU72-202ENST00000359060 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 OR6C75A6NL08 312 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 ZBTB14O43829 449 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 KATNA1O75449 491 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 GUCA1CO95843 209 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 GOT2P00505 430 aaKnown RBP11.23□□□□□ -0.61
SSU72-202ENST00000359060 FGF1P05230 155 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 XPAP23025 273 aaPredicted RBP11.23□□□□□ -0.61
SSU72-202ENST00000359060 RNF220Q5VTB9 566 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 FUT10Q6P4F1 479 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 AAGABQ6PD74 315 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 KIAA0408Q6ZU52 694 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 LCA5Q86VQ0 697 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 TSGA13Q96PP4 275 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 PLAC1Q9HBJ0 212 aa11.23□□□□□ -0.61
SSU72-202ENST00000359060 GNGT2O14610 69 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 SORBS2O94875 1100 aaKnown RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 HLA-DPA1P20036 260 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 PAX3P23760 479 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 HTR7P34969 479 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 NDST2P52849 883 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 ADAM17P78536 824 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 IL1RL1Q01638 556 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 SCD5Q86SK9 330 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 TRPV1Q8NER1 839 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 PGAP3Q96FM1 320 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 MRGPRX2Q96LB1 330 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 SORT1Q99523 831 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 ZBTB18Q99592 522 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 SLC25A23Q9BV35 468 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 MRGBPQ9NV56 204 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CORO1CQ9ULV4 474 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 I6L893 689 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 MATN2O00339 956 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CASQ2O14958 399 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 SNRPB2P08579 225 aaKnown RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 CKBP12277 381 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CDC16Q13042 620 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 TRIP4Q15650 581 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 SIRPB2Q5JXA9 342 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 PIK3R6Q5UE93 754 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 TXNDC5Q8NBS9 432 aaKnown RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 ESAMQ96AP7 390 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
SSU72-202ENST00000359060 TTPALQ9BTX7 342 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
SSU72-202ENST00000359060 GID8Q9NWU2 228 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 CRLS1Q9UJA2 301 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 SLC4A7Q9Y6M7 1214 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 G3V2L1 256 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 SIX3O95343 332 aaPredicted RBP11.22□□□□□ -0.61
SSU72-202ENST00000359060 EOMESO95936 686 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 IL1BP01584 269 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 LINC00032P0C843 101 aa11.22□□□□□ -0.61
SSU72-202ENST00000359060 TUFMP49411 452 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms