RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 TMEM88BA6NKF7 163 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 UBFD1O14562 309 aaKnown RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ACOT8O14734 319 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MUSKO15146 869 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PRAMEF11O60813 436 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 GJB3O75712 270 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 BCAS2O75934 225 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TBX18O95935 607 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 UBTFL6P0CB48 400 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 CCDC166P0CW27 439 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 UQCRBP14927 111 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ARSAP15289 507 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TM4SF4P48230 202 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 KCNC1P48547 511 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MAPKAPK2P49137 400 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MS4A2Q01362 244 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RING1Q06587 406 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 SREBF2Q12772 1141 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 GRM2Q14416 872 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TRIP10Q15642 601 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PARP15Q460N3 678 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ACBD5Q5T8D3 534 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MAP3K21Q5TCX8 1036 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RASIP1Q5U651 963 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RAP1GAP2Q684P5 730 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 NADSYN1Q6IA69 706 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ZNF549Q6P9A3 640 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ISCA2Q86U28 154 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TICAM1Q8IUC6 712 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TMEM126BQ8IUX1 230 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ATAD1Q8NBU5 361 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 HIPK4Q8NE63 616 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 GPR150Q8NGU9 434 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 GABPB2Q8TAK5 448 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 HDAC10Q969S8 669 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PABPC5Q96DU9 382 aaKnown RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 FEM1CQ96JP0 617 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TRAPPC9Q96Q05 1148 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 BTBD9Q96Q07 612 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ZIC5Q96T25 663 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 CDRT15Q96T59 188 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 CRISPLD1Q9H336 500 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 EFCAB1Q9HAE3 211 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 CYP4F12Q9HCS2 524 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 OLA1Q9NTK5 396 aaKnown RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RIMS3Q9UJD0 308 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RIMKLBQ9ULI2 386 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PRG3Q9Y2Y8 225 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 KCTD3Q9Y597 815 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TLL2Q9Y6L7 1015 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MTMR11A4FU01 709 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 OR51F1A6NGY5 319 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 OR6C75A6NL08 312 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 CCL22O00626 93 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TBC1D4O60343 1298 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RAMP2O60895 175 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PRKAR2AP13861 404 aaKnown RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 HLA-DPA1P20036 260 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 IMPDH1P20839 514 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 FGFR3P22607 806 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 YWHAQP27348 245 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ACVRL1P37023 503 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PBX3P40426 434 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 OR1G1P47890 313 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 CCNHP51946 323 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 YBEYP58557 167 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ILF2Q12905 390 aaKnown RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 FLOT2Q14254 428 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 SQLEQ14534 574 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 SEMA3AQ14563 771 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RNF220Q5VTB9 566 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 NXNQ6DKJ4 435 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 FAM45BPQ6NSW5 357 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 C8orf82Q6P1X6 216 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 ZFP1Q6P2D0 407 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 GK5Q6ZS86 529 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 RPS27LQ71UM5 84 aaKnown RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PTAR1Q7Z6K3 402 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 LDB1Q86U70 411 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PIM3Q86V86 326 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 CIR1Q86X95 450 aaPredicted RBP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 SLC22A9Q8IVM8 553 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 FAM45AQ8TCE6 357 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 DLG3Q92796 817 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 FBXO32Q969P5 355 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PTERQ96BW5 349 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 SPATA17Q96L03 361 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TRIB3Q96RU7 358 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 TRMOQ9BU70 441 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 YIPF3Q9GZM5 350 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 NMRK2Q9NPI5 230 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MRGBPQ9NV56 204 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MARCH5Q9NX47 278 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 GTSE1Q9NYZ3 720 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 MARCH2Q9P0N8 246 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 NOD1Q9Y239 953 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 PCDHGA7Q9Y5G6 932 aa7.08□□□□□ -1.28
KCNIP4-201ENST00000359001 STX16-NPEPL1H3BU86 382 aa7.07□□□□□ -1.28
KCNIP4-201ENST00000359001 FBP2O00757 339 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms