RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FADS3Q9Y5Q0 445 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 UGT1A9O60656 530 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 PQBP1O60828 265 aaKnown RBP13.77□□□□□ -0.21
VCP-201ENST00000358901 TCEA3O75764 348 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 LRIG2O94898 1065 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 METTL18O95568 372 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 COL6A2P12110 1019 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 HOXD13P35453 343 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 AIF1P55008 147 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 PHKG1Q16816 387 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 C6orf52Q5T4I8 152 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 DCLRE1AQ6PJP8 1040 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 FAM156AQ8NDB6 213 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 PPM1MQ96MI6 270 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 TSEN34Q9BSV6 310 aaKnown RBP13.77□□□□□ -0.21
VCP-201ENST00000358901 RAD21L1Q9H4I0 556 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 UGT1A7Q9HAW7 530 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 UGT1A10Q9HAW8 530 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 UGT1A8Q9HAW9 530 aa13.77□□□□□ -0.21
VCP-201ENST00000358901 CCL22O00626 93 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 TLR5O60602 858 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 SLC22A3O75751 556 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 TALDO1P37837 337 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 CENPAP49450 140 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 ANGPT1Q15389 498 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PSMD5Q16401 504 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 CA9Q16790 459 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 RGS21Q2M5E4 152 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 SLC10A6Q3KNW5 377 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 DCBLD1Q8N8Z6 715 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 DTLQ9NZJ0 730 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 DERAQ9Y315 318 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PMM2O15305 246 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 ASNA1O43681 348 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 MT-CYBP00156 380 aaPredicted RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 OTCP00480 354 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 MT-ND1P03886 318 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 IL1R2P27930 398 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 CRATP43155 626 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 NRG1Q02297 640 aaPredicted RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 PLCL1Q15111 1095 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PDZK1Q5T2W1 519 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 GPR158Q5T848 1215 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 SDE2Q6IQ49 451 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 SLCO2A1Q92959 643 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 DPEP3Q9H4B8 488 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PLGRKTQ9HBL7 147 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 DNMT3LQ9UJW3 386 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 SNX6Q9UNH7 406 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 TDRKHQ9Y2W6 561 aaKnown RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 U3KQV3 271 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PIK3C2AO00443 1686 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PABPC1P11940 636 aaKnown RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 ZNF37AP17032 561 aaPredicted RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 ARL4DP49703 201 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 LSM12Q3MHD2 195 aaKnown RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 HECTD2Q5U5R9 776 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 RHBDF2Q6PJF5 856 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 CACUL1Q86Y37 369 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 SPPL2CQ8IUH8 684 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PGAM4Q8N0Y7 254 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PARP8Q8N3A8 854 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 AGO3Q9H9G7 860 aaKnown RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PIPSLA2A3N6 862 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 CKBP12277 381 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 CTPS1P17812 591 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 CLEC6AQ6EIG7 209 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 ARMC6Q6NXE6 501 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 ESRP1Q6NXG1 681 aaKnown RBP13.76□□□□□ -0.21
VCP-201ENST00000358901 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 DET1Q7L5Y6 550 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 GPR180Q86V85 440 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 OOSP2Q86WS3 158 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 ZNF540Q8NDQ6 660 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 PPTC7Q8NI37 304 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 DNAJC28Q9NX36 388 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 ENOPH1Q9UHY7 261 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 POMPQ9Y244 141 aa13.76□□□□□ -0.21
VCP-201ENST00000358901 MYH10P35580 1976 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 FAM149AA5PLN7 773 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 FAM25AB3EWG3 89 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 FAM25CB3EWG5 89 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 FAM25GB3EWG6 89 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 TBX10O75333 385 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 CCNA2P20248 432 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 POLR2LP62875 67 aaKnown RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
VCP-201ENST00000358901 NR1D2Q14995 579 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 ACOX1Q15067 660 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 ZNF549Q6P9A3 640 aa13.75□□□□□ -0.21
VCP-201ENST00000358901 TRAPPC5Q8IUR0 188 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms