RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RORBQ92753 470 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 NSMCE2Q96MF7 247 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 MCCC1Q96RQ3 725 aaPredicted RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 FBXO44Q9H4M3 255 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 IRAK3Q9Y616 596 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ANKRD34BA5PLL1 514 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ZSCAN5CA6NGD5 496 aaPredicted RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 CLDN4O14493 209 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ACADSP16219 412 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 VARSP26640 1264 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 HNF1BP35680 557 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SNRPD1P62314 119 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 CCDC153Q494R4 210 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ADGRA1Q86SQ6 560 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 BPIFB6Q8NFQ5 453 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 DPYSL5Q9BPU6 564 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ZSCAN5AQ9BUG6 496 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 NUAK2Q9H093 628 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 NDUFAF1Q9Y375 327 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SPATA31A5Q5VU36 1347 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SPATA31A7Q8IWB4 1347 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 CNTNAP5Q8WYK1 1306 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 LOC110117498-PIK3R3F6TDL0 507 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 HDCP19113 662 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 CD53P19397 219 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 RYKP34925 604 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 FXR1P51114 621 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHD3-202ENST00000358181 PPP3R1P63098 170 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 FASTKQ14296 549 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 GRIK4Q16099 956 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TRAPPC12Q8WVT3 735 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 PIK3R3Q92569 461 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 GLIS2Q9BZE0 524 aaPredicted RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 HEY2Q9UBP5 337 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 IKZF3Q9UKT9 509 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 KCNS2Q9ULS6 477 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 RPTORQ8N122 1335 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 B4DGG1 531 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 H3BM21 787 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 OGTO15294 1046 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SGPL1O95470 568 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 CSTF2P33240 577 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHD3-202ENST00000358181 BCAT1P54687 386 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 PEX6Q13608 980 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 KLHL35Q6PF15 583 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 USP38Q8NB14 1042 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 AVL9Q8NBF6 648 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 OR7D4Q8NG98 312 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ATG4AQ8WYN0 398 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 OR8D1Q8WZ84 308 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 C2orf49Q9BVC5 232 aaPredicted RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 FAM126AQ9BYI3 521 aaPredicted RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 HIF1ANQ9NWT6 349 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 HAO1Q9UJM8 370 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 DDTLA6NHG4 134 aaPredicted RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 OAZ2O95190 189 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SLURP2P0DP57 97 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TCF4P15884 667 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TSPAN8P19075 237 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 CD86P42081 329 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 MAGEA12P43365 314 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 NAMPTP43490 491 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TAS2R50P59544 299 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TXNL4AP83876 142 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 ZNF844Q08AG5 666 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 C7orf57Q8NEG2 295 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SEMA3GQ9NS98 782 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 GLS2Q9UI32 602 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SAMD4AQ9UPU9 718 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 CCT8L1PA6NM43 557 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 HCN1O60741 890 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 CTDNEP1O95476 244 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SLC13A2Q13183 592 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ZIK1Q3SY52 487 aaPredicted RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 ZBTB8BQ8NAP8 495 aaPredicted RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 WRAP53Q9BUR4 548 aaKnown RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 B3GNT4Q9C0J1 378 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ABCB9Q9NP78 766 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 CCDC167Q9P0B6 97 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ZBTB11O95625 1053 aaPredicted RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 BGNP21810 368 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 PAX7P23759 505 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ZNF627Q7L945 461 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 OTOP2Q7RTS6 562 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SLC22A9Q8IVM8 553 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ARL10Q8N8L6 244 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 RIPOR3Q96MK2 946 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 ADAM2Q99965 735 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 WASF2Q9Y6W5 498 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 PTPRJQ12913 1337 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 CPS1P31327 1500 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 MPPED1O15442 326 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 SLC25A14O95258 325 aaPredicted RBP9.79□□□□□ -0.84
CHD3-202ENST00000358181 ENTPD1P49961 510 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 AQP5P55064 265 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 BROXQ5VW32 411 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 GCNT7Q6ZNI0 430 aa9.79□□□□□ -0.84
CHD3-202ENST00000358181 LPCAT2Q7L5N7 544 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms