RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 NDUFAF1Q9Y375 327 aa17.8■□□□□ 0.44
RTN4-204ENST00000357732 A0A0J9YVX5 310 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 MYOCOSA0A1B0GUC4 107 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 TRIM64A6NGJ6 449 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 PFDN1O60925 122 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 IGLV3-25P01717 112 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 PYGLP06737 847 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 HOXB8P17481 243 aaPredicted RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 ADARP55265 1226 aaKnown RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 INPP5AQ14642 412 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 OLFML2BQ68BL8 750 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 HMBOX1Q6NT76 420 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 TAC4Q86UU9 113 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 FIBCD1Q8N539 461 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 SMG8Q8ND04 991 aaKnown RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 GPATCH1Q9BRR8 931 aaKnown RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 GSTO2Q9H4Y5 243 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 DUS2Q9NX74 493 aaKnown RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 CCDC78A2IDD5 438 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 DFFAO00273 331 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 CSPG5O95196 566 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 HSD17B1P14061 328 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 IGFBP6P24592 240 aaPredicted RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 NME5P56597 212 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 FOXM1Q08050 763 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 EIF4EBP2Q13542 120 aaPredicted RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 COLGALT2Q8IYK4 626 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 MINDY1Q8N5J2 469 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 USP33Q8TEY7 942 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 FATE1Q969F0 183 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 PPWD1Q96BP3 646 aaKnown RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 SGF29Q96ES7 293 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 SLC29A1Q99808 456 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 CIB1Q99828 191 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 NOL11Q9H8H0 719 aaKnown RBP17.79■□□□□ 0.44
RTN4-204ENST00000357732 IRAK4Q9NWZ3 460 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 ZNHIT2Q9UHR6 403 aa17.79■□□□□ 0.44
RTN4-204ENST00000357732 PTGESO14684 152 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 MYF6P23409 242 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 PCSK1P29120 753 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 PGGT1BP53609 377 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 RALGDSQ12967 914 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 MYO1HQ8N1T3 1032 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 SPATA6LQ8N4H0 392 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 TERB1Q8NA31 727 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 ARRDC4Q8NCT1 418 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 RNF34Q969K3 372 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 MRGPRX2Q96LB1 330 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 TSPYL2Q9H2G4 693 aaPredicted RBP17.78■□□□□ 0.44
RTN4-204ENST00000357732 CD320Q9NPF0 282 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 SLC2A6Q9UGQ3 507 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 NUP205Q92621 2012 aa17.78■□□□□ 0.44
RTN4-204ENST00000357732 NEMP2A6NFY4 417 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 WISP3O95389 354 aaPredicted RBP17.77■□□□□ 0.44
RTN4-204ENST00000357732 FCGR1AP12314 374 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 SLC7A2P52569 658 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 CRYBB1P53674 252 aaPredicted RBP17.77■□□□□ 0.44
RTN4-204ENST00000357732 PRKCQQ04759 706 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 MANEALQ5VSG8 457 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 RWDD4Q6NW29 188 aaKnown RBP17.77■□□□□ 0.44
RTN4-204ENST00000357732 ISLR2Q6UXK2 745 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 DPP9Q86TI2 863 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 DNAJB3Q8WWF6 145 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 C19orf60Q96EN9 201 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 FEM1CQ96JP0 617 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 SNX10Q9Y5X0 201 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 SLC7A4O43246 635 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 FGF4P08620 206 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 IL10P22301 178 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 GPX3P22352 226 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 RAB15P59190 212 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 ADAM17P78536 824 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 ZBED5Q49AG3 693 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 AFMIDQ63HM1 303 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 LCN8Q6JVE9 175 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 GPR141Q7Z602 305 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 CLYBLQ8N0X4 340 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 DQX1Q8TE96 717 aaKnown RBP17.77■□□□□ 0.44
RTN4-204ENST00000357732 TSPEARQ8WU66 669 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 EDEM1Q92611 657 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 OLFM1Q99784 485 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 C9orf16Q9BUW7 83 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 ATP13A1Q9HD20 1204 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 TBCCD1Q9NVR7 557 aa17.77■□□□□ 0.44
RTN4-204ENST00000357732 CHCHD3Q9NX63 227 aaKnown RBP17.77■□□□□ 0.44
RTN4-204ENST00000357732 MYLKQ15746 1914 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 MYBPHLA2RUH7 354 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 PDHXO00330 501 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 AKAP10O43572 662 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 KCNA5P22460 613 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 IRF5Q13568 498 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 PPP1R3AQ16821 1122 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 ZNF678Q5SXM1 525 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 RBM20Q5T481 1227 aaKnown RBP17.76■□□□□ 0.43
RTN4-204ENST00000357732 CTU1Q7Z7A3 348 aaKnown RBP17.76■□□□□ 0.43
RTN4-204ENST00000357732 ZNF420Q8TAQ5 688 aaPredicted RBP17.76■□□□□ 0.43
RTN4-204ENST00000357732 CYP4F12Q9HCS2 524 aa17.76■□□□□ 0.43
RTN4-204ENST00000357732 GID8Q9NWU2 228 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms