RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PQBP1O60828 265 aaKnown RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 PEX11AO75192 247 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 KCNJ2P63252 427 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 TRIM40Q6P9F5 258 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ARHGAP22Q7Z5H3 698 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ITCHQ96J02 903 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 LGMNQ99538 433 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 CLN6Q9NWW5 311 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 AGO1Q9UL18 857 aaKnown RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 TDRKHQ9Y2W6 561 aaKnown RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 C5orf60A6NFR6 353 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 AHCYL1O43865 530 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 FECHP22830 423 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 PRDX6P30041 224 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 LSM12Q3MHD2 195 aaKnown RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ARMC3Q5W041 872 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 CERS6Q6ZMG9 384 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 MACC1Q6ZN28 852 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 GPR142Q7Z601 462 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 LRRC57Q8N9N7 239 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 OR7A2PQ8NGA2 310 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 MAGEE2Q8TD90 523 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 S100ZQ8WXG8 99 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 BTN2A3PQ96KV6 586 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 COPS8Q99627 209 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 SPRTNQ9H040 489 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 HDHD2Q9H0R4 259 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 CLEC4MQ9H2X3 399 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ASAH2Q9NR71 780 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 FAM105AQ9NUU6 356 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ZSCAN32Q9NX65 697 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 DNAJA2O60884 412 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 WEE1P30291 646 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 HSPA14Q0VDF9 509 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 DGKKQ5KSL6 1271 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ADGRD1Q6QNK2 874 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 XYLT1Q86Y38 959 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 CXorf40AQ8TE69 158 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 CSPG4P5Q96PW8 444 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 DCUN1D5Q9BTE7 237 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 POLE3Q9NRF9 147 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 PSMD13Q9UNM6 376 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ST3GAL5Q9UNP4 418 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 CCDC189A1A4V9 331 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 WARSP23381 471 aaKnown RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ADARP55265 1226 aaKnown RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 CRADDP78560 199 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 MOSPD2Q8NHP6 518 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 FBXO30Q8TB52 745 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 FCRL2Q96LA5 508 aaPredicted RBP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 QKIQ96PU8 341 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL9A1-202ENST00000357250 TBCDQ9BTW9 1192 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 ZDHHC6Q9H6R6 413 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 NEK6Q9HC98 313 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 DNAJC28Q9NX36 388 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 VPS4AQ9UN37 437 aa11.79□□□□□ -0.52
COL9A1-202ENST00000357250 IGLV3-22A0A075B6J6 115 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 RBM47A0AV96 593 aaKnown RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 NOL4O94818 638 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ZNHIT3Q15649 155 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ALFQ53S48 1182 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 C16orf59Q7L2K0 433 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SLC38A2Q96QD8 506 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 GPR20Q99678 358 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 RHOBTB2Q9BYZ6 727 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 TTYH3Q9C0H2 523 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 GTF2A1LQ9UNN4 478 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SLC9A8Q9Y2E8 581 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 GMPPBQ9Y5P6 360 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 PIPSLA2A3N6 862 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ARL2P36404 184 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 GSTM5P46439 218 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 PEX6Q13608 980 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 FAM46CQ5VWP2 391 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 MZT2BQ6NZ67 158 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ANKRD23Q86SG2 305 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 OR52L1Q8NGH7 329 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 JOSD2Q8TAC2 188 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ZNF483Q8TF39 744 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 TRAF6Q9Y4K3 522 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 IRGMA1A4Y4 181 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SHOX2O60902 331 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 KRT36O76013 467 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 C2P06681 752 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ADH1AP07327 375 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 FEN1P39748 380 aaKnown RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 CDKN2BP42772 138 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 COPZ1P61923 177 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 C10orf107Q8IVU9 208 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 RCN3Q96D15 328 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 TEFMQ96QE5 360 aaKnown RBP11.78□□□□□ -0.52
COL9A1-202ENST00000357250 ADI1Q9BV57 179 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 GRIP2Q9C0E4 1043 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 SEMA6AQ9H2E6 1030 aa11.78□□□□□ -0.52
COL9A1-202ENST00000357250 NRP2O60462 931 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms