RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 NDUFB5O43674 189 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 LGALS2P05162 132 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 NR2F6P10588 404 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 GALK1P51570 392 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 PRKAG1P54619 331 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SPIBQ01892 262 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 OR2T12Q8NG77 320 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 WDR55Q9H6Y2 383 aaPredicted RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 TRPV2Q9Y5S1 764 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 TECPR2O15040 1411 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 TNS2Q63HR2 1409 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 A8MX80 341 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 UGT2B11O75310 529 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 MAFO75444 373 aaPredicted RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 C2P06681 752 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SKP1P63208 163 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 ITSN1Q15811 1721 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 RAP1GAP2Q684P5 730 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 SPATA19Q7Z5L4 167 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 PEG10Q86TG7 708 aaKnown RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 TRAPPC5Q8IUR0 188 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 HPS1Q92902 700 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 PCDHB18PQ96TA0 734 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 GAD1Q99259 594 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 FAIM2Q9BWQ8 316 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 PCDH18Q9HCL0 1135 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 DPP7Q9UHL4 492 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 R3HDM2Q9Y2K5 976 aaKnown RBP14.9□□□□□ -0.02
CHD4-201ENST00000357008 SH3GLB1Q9Y371 365 aa14.9□□□□□ -0.02
CHD4-201ENST00000357008 TPSB2P20231 275 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 MED22Q15528 200 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 TPSAB1Q15661 275 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 TIGD2Q4W5G0 525 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 PAGE2Q7Z2X7 111 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 DSG4Q86SJ6 1040 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 ZNF557Q8N988 423 aaPredicted RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 P2RY11Q96G91 374 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 COX4I2Q96KJ9 171 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 YME1L1Q96TA2 773 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 DENND2DQ9H6A0 471 aaPredicted RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 PCDH12Q9NPG4 1184 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 OGDHLQ9ULD0 1010 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 DPPA5A6NC42 116 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 COPZ1P61923 177 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 DSELQ8IZU8 1212 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 OR2T34Q8NGX1 318 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 OR2T3Q8NH03 318 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 SLC9A8Q9Y2E8 581 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 PAPSS1O43252 624 aaPredicted RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 SUV39H1O43463 412 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 MYL9P24844 172 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 PSEN2P49810 448 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 AIF1P55008 147 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 TRIM40Q6P9F5 258 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 CIB1Q99828 191 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 LHX5Q9H2C1 402 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 MUC13Q9H3R2 512 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 SSU72Q9NP77 194 aaKnown RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 SMIM22K7EJ46 135 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 MTA2O94776 668 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 MPSTP25325 297 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 ABL2P42684 1182 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 FKBP1AP62942 108 aaKnown RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 BIKQ13323 160 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 ADGRD1Q6QNK2 874 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 GK5Q6ZS86 529 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 CXXC5Q7LFL8 322 aaKnown RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 PIGUQ9H490 435 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 CAB39LQ9H9S4 337 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 CASZ1Q86V15 1759 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 HMGB3O15347 200 aaKnown RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 OR10H3O60404 316 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 MSX2P35548 267 aaPredicted RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 TNFSF9P41273 254 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 EML3Q32P44 896 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 PGAM4Q8N0Y7 254 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 NAT14Q8WUY8 206 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 LGALS13Q9UHV8 139 aa14.89□□□□□ -0.03
CHD4-201ENST00000357008 SAMD4AQ9UPU9 718 aaKnown RBP14.89□□□□□ -0.03
CHD4-201ENST00000357008 LOC110117498-PIK3R3F6TDL0 507 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 PSMD11O00231 422 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 RHAGQ02094 409 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 CAPSQ13938 189 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 R3HCC1LQ7Z5L2 792 aaKnown RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 CAMKK1Q8N5S9 505 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 BTBD9Q96Q07 612 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 S100A13Q99584 98 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 MRPL9Q9BYD2 267 aaKnown RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 STARD7Q9NQZ5 370 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 DNM1LO00429 736 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 KPNA3O00505 521 aaPredicted RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 SIN3BO75182 1162 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 NUDT14O95848 222 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 LPOP22079 712 aaPredicted RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 MMP8P22894 467 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 CDH13P55290 713 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 ANXA8L1Q5VT79 327 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 FKBP1CQ5VVH2 108 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 NEK5Q6P3R8 708 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 FAM220AQ7Z4H9 259 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms