RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 CBX5P45973 191 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 GRSF1Q12849 480 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RAPSNQ13702 412 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CXCL17Q6UXB2 119 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PIGWQ7Z7B1 504 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TTC7BQ86TV6 843 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TCAIMQ8N3R3 496 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 AP3S1Q92572 193 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SPATA13Q96N96 652 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SLC4A9Q96Q91 983 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PORCNQ9H237 461 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 IMP3Q9NV31 184 aaKnown RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TBC1D30Q9Y2I9 924 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TNS2Q63HR2 1409 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ABHD14A-ACY1A0A1B0GW23 586 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 VIPP01282 170 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PRKCIP41743 596 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CRYBB1P53674 252 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RIPPLY1Q0D2K3 151 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DGKZQ13574 1117 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PFKFB4Q16877 469 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ARSJQ5FYB0 599 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 NEPROQ6NW34 567 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PSRC1Q6PGN9 363 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 SV2AQ7L0J3 742 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 HDDC3Q8N4P3 179 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 GPR156Q8NFN8 814 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF483Q8TF39 744 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 HDAC7Q8WUI4 952 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RAD51AP1Q96B01 352 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RXFP1Q9HBX9 757 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 KCNQ5Q9NR82 932 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 EHD3Q9NZN3 535 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 COL1A2P08123 1366 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 E5RJQ4 531 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 BCL10O95999 233 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 NOS2P35228 1153 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 AVPR1BP47901 424 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 AIF1P55008 147 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 PLA2G4EQ3MJ16 856 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TRIM40Q6P9F5 258 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 IZUMO2Q6UXV1 221 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 CATSPERGQ6ZRH7 1159 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 C8orf59Q8N0T1 100 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TOP6BLQ8N6T0 577 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ADCY4Q8NFM4 1077 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 OR6Y1Q8NGX8 325 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF398Q8TD17 642 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 ITCHQ96J02 903 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DEFB118Q96PH6 123 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TAPBPLQ9BX59 468 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 LRMDAQ9H2I8 198 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 DCLRE1BQ9H816 532 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 RNPEPL1Q9HAU8 725 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 EXD2Q9NVH0 621 aa5.56□□□□□ -1.52
PTPRD-202ENST00000356435 TRDMT1O14717 391 aaKnown RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 UGT2B17O75795 530 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 UBXN7O94888 489 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 FGF1P05230 155 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 BUD31P41223 144 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 IL12RB1P42701 662 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 BCAP31P51572 246 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 TAS2R41P59536 307 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ATP6V0D1P61421 351 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ATXN7L2Q5T6C5 722 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 KCNT2Q6UVM3 1135 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 RBFAQ8N0V3 343 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 SUN3Q8TAQ9 357 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 NARS2Q96I59 477 aaKnown RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ACE2Q9BYF1 805 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 TMPRSS4Q9NRS4 437 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 HAO1Q9UJM8 370 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ASF1AQ9Y294 204 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 PDLIM1O00151 329 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 DNM1LO00429 736 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 SSNA1O43805 119 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 SNX3O60493 162 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 MATN4O95460 622 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ERVK-21P61565 698 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ILF3Q12906 894 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 BNIP1Q12981 228 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 PUS10Q3MIT2 529 aaKnown RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 RFTN2Q52LD8 501 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 UNC5BQ8IZJ1 945 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 C12orf50Q8NA57 414 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 UBASH3BQ8TF42 649 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 STK32AQ8WU08 396 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF606Q8WXB4 792 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 DLG3Q92796 817 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 HAVCR1Q96D42 359 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 RIOX1Q9H6W3 641 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 INTS10Q9NVR2 710 aaKnown RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 RIMS1Q86UR5 1692 aaKnown RBP5.55□□□□□ -1.52
PTPRD-202ENST00000356435 H0Y858 1186 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 TMCC2O75069 709 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 CLPTM1O96005 669 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 MT-CO1P00395 513 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 FGBP02675 491 aa5.55□□□□□ -1.52
PTPRD-202ENST00000356435 BMP7P18075 431 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms