RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TSPAN17Q96FV3 270 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 CDKN2AIPNLQ96HQ2 116 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 OMDQ99983 421 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 THAP1Q9NVV9 213 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 OBP2AQ9NY56 170 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 CHKBQ9Y259 395 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 HCFC2Q9Y5Z7 792 aa17.28■□□□□ 0.36
VPS13B-201ENST00000355155 CCDC189A1A4V9 331 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 WASH3PC4AMC7 463 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 CD70P32970 193 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 CTBP1Q13363 440 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 FASTKD1Q53R41 847 aaKnown RBP17.27■□□□□ 0.36
VPS13B-201ENST00000355155 TAF1BQ53T94 588 aaPredicted RBP17.27■□□□□ 0.36
VPS13B-201ENST00000355155 CENPLQ8N0S6 344 aaPredicted RBP17.27■□□□□ 0.36
VPS13B-201ENST00000355155 ECHDC3Q96DC8 303 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 TRPV4Q9HBA0 871 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 SPHK2Q9NRA0 654 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 HAO1Q9UJM8 370 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 SLC12A4Q9UP95 1085 aa17.27■□□□□ 0.36
VPS13B-201ENST00000355155 HAUS5O94927 633 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 SNUPNO95149 360 aaKnown RBP17.27■□□□□ 0.35
VPS13B-201ENST00000355155 KLHL2O95198 593 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 SERPINE1P05121 402 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 TROVE2P10155 538 aaKnown RBP eCLIP17.27■□□□□ 0.35
VPS13B-201ENST00000355155 STMN1P16949 149 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 ADARP55265 1226 aaKnown RBP17.27■□□□□ 0.35
VPS13B-201ENST00000355155 CDKN3Q16667 212 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 FAM45BPQ6NSW5 357 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 FAM45AQ8TCE6 357 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 GRIN3AQ8TCU5 1115 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 DNAJC1Q96KC8 554 aaKnown RBP17.27■□□□□ 0.35
VPS13B-201ENST00000355155 KCNK13Q9HB14 408 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 DZANK1Q9NVP4 752 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 YBX2Q9Y2T7 364 aaKnown RBP17.27■□□□□ 0.35
VPS13B-201ENST00000355155 ARL5AQ9Y689 179 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 C2orf16Q68DN1 1984 aa17.27■□□□□ 0.35
VPS13B-201ENST00000355155 A0A1W2PQ67 120 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 CCDC162PA2VCL2 907 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 TMEM114B3SHH9 223 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 DNAJC6O75061 913 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 FSBPO95073 299 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 GOT2P00505 430 aaKnown RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 DLDP09622 509 aaKnown RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 ALOX15P16050 662 aaPredicted RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 LPOP22079 712 aaPredicted RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 PTPN5P54829 565 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 BST1Q10588 318 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 USP10Q14694 798 aaKnown RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 MRNIPQ6NTE8 343 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 ZYG11AQ6WRX3 759 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 KDELC2Q7Z4H8 507 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 CCDC63Q8NA47 563 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 UBXN10Q96LJ8 280 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 STN1Q9H668 368 aaKnown RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 COL4A3Q01955 1670 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 C2orf81A6NN90 581 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 KIAA0754O94854 1291 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 PRAMEF12O95522 483 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 GLP2RO95838 553 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 PDHA1P08559 390 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 SBK3P0C264 359 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 FDXRP22570 491 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 HLA-FP30511 346 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 SKIV2L2P42285 1042 aaKnown RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 FUT11Q495W5 492 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 LINGO4Q6UY18 593 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 FAM47EQ6ZV65 393 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 CELF5Q8N6W0 485 aaKnown RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 PCDH20Q8N6Y1 951 aaKnown RBP17.26■□□□□ 0.35
VPS13B-201ENST00000355155 OR4L1Q8NH43 312 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 TBATAQ96M53 351 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 NMRAL1Q9HBL8 299 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 SLC39A10Q9ULF5 831 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 ACOT9Q9Y305 439 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 KCTD3Q9Y597 815 aa17.26■□□□□ 0.35
VPS13B-201ENST00000355155 GOLGA8TH3BQL2 631 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CD3EAPO15446 510 aaKnown RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 HOXC11O43248 304 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 TOP3BO95985 862 aaKnown RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 SRCP12931 536 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CEBPBP17676 345 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 KPNA2P52292 529 aaKnown RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 STC1P52823 247 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 PRAMEP78395 509 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CHI3L2Q15782 390 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CNSTQ6PJW8 725 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CCDC121Q6ZUS5 278 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 SLC41A1Q8IVJ1 513 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CEP97Q8IW35 865 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 BLOC1S5Q8TDH9 187 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 MICAL1Q8TDZ2 1067 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 SFXN1Q9H9B4 322 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 TLK1Q9UKI8 766 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 FCF1Q9Y324 198 aaKnown RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CCDC195A0A1B0GUA6 201 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 IGSF6O95976 241 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 MT-CO1P00395 513 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CPA3P15088 417 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 HK2P52789 917 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 TAS2R39P59534 338 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms